KEGG   Photobacterium atrarenae: NNL38_18840
Entry
NNL38_18840       CDS       T10583                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pate  Photobacterium atrarenae
Pathway
pate02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pate00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NNL38_18840
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pate02022]
    NNL38_18840
Two-component system [BR:pate02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   NNL38_18840
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 Mg_chelatase AAA_16 AAA AAA_2 BrxC_BrxD MCM AAA_RNF213_3
Other DBs
NCBI-ProteinID: UTV30622
UniProt: A0ABY5GMT6
LinkDB
Position
2:599204..600553
AA seq 449 aa
MPLPEKMPLALIEDDEIVRQATSQWLQLDGHQVLEFADGESALNQLPPDFPGIIISDVRL
PDIDGMALLPRLLERHPEIPVILITGHGDVDMAVKALRDGAFDFVEKPFDPARLLQTVAR
ALETRRSQTAQQDRHAYLAQAEGLEKVLIGRSEAMVRLRQQLLKVAAIDTNVIIYGETGC
GKELVAHCLHQFSTRNQREFVPINCAAIPENLFESELFGHEAGAFTGAVKRRVGKLEYAD
QGTLFLDEVESMPLNMQVKVLRALQENTVERVGGNRPIHIDLRVIAAAKEDLHHHPEFRQ
DLFYRLNVAQLYLPPLAERSEDILLLFDHYTHQVNPDTRLPSPSDQQALMRYPWPGNVRE
LKNIATRFALDPSLTVGEILASRPNLTTEPSSATLPLAIQVQNFERKVIHECLQRHHGSI
IDALEELDLPRRTLNQKMQKYGLSRSDYT
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgccattaccggaaaaaatgccgcttgccctgatcgaagatgatgaaattgtccgccag
gccaccagccagtggttacagctggacgggcaccaggtgctggagtttgccgacggcgaa
tccgccctgaaccagctcccgcccgactttccggggatcatcatcagtgatgtccgattg
ccggacatcgacggcatggccctgctaccccgcctgcttgagcgccatccggagatcccg
gtgatcctgatcaccggccatggcgatgtcgatatggcggttaaagcactgcgcgacggg
gctttcgattttgtcgaaaagccgttcgacccggcccggctgttgcaaacggtggcccgc
gccctcgaaacccgccggagccagaccgcccagcaggacaggcatgcctacctggcgcaa
gcggaagggctggaaaaagtactgatcggccgcagcgaggccatggtccgcctgcgccag
caactgctgaaagtcgccgccatcgataccaatgtgattatctacggcgaaaccggctgc
ggcaaagagctggtcgcccactgcctccatcaattcagcacccgcaaccagcgtgaattt
gtcccgatcaactgtgcagcgatcccggaaaacctgttcgagagtgagctgttcggccat
gaagccggcgcatttaccggcgccgtcaaacggcgggttggtaagctggaatatgccgat
caaggcaccctgtttctcgatgaagtcgagagcatgccgctcaatatgcaggttaaggtg
ttgcgcgccttgcaggaaaataccgtcgagcgggttggcggcaatcgcccgatccatatc
gatctgcgggtgatcgccgccgccaaggaagatcttcatcatcatccggaatttcgccag
gatctgttctaccgcctcaacgtcgcccagctctacttgccgcccttggctgagcgcagc
gaagatatcctgctgctgtttgatcactacacccatcaggtcaatccggatacccgcctg
ccaagccccagtgatcagcaggcgctgatgcgttatccctggccgggcaatgtccgcgaa
ctgaaaaatatcgccacccgttttgccttagatcccagcctgacggtcggggagatcctg
gcttctcggccgaacctgaccaccgaaccttccagtgccaccctgccgctggcgatccag
gtgcaaaattttgagcgcaaagtaatccacgaatgcctgcagcggcatcacggcagcatt
attgatgcactggaggaactcgatctgccccgccgtaccctgaatcagaaaatgcagaaa
tacggtctcagccgcagcgattacacctga

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