Photobacterium atrarenae: NNL38_20800
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Entry
NNL38_20800 CDS
T10583
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pate Photobacterium atrarenae
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pate03000
]
NNL38_20800
Transcription factors [BR:
pate03000
]
Prokaryotic type
Helix-turn-helix
Other families
NNL38_20800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
HTH_30
AAA_2
AAA_5
HTH_7
nSTAND6
HTH_23
Mg_chelatase
HTH_22
AAA
MCM
HTH_17
AAA_16
AAA_3
HTH_28
HTH_1
HTH_29
DUF2089
nSTAND3
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UTV29461
UniProt:
A0ABY5GJX9
LinkDB
All DBs
Position
2:1050909..1052729
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AA seq
606 aa
AA seq
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MHPFPETDLSPWRDNWLEQSWRRSEQAGLAQQQAPEHVRLDQQQLSERQFHAQGLIRVVE
QWALPLFNQMLAGSNSRLLLTDQEGVIIGAWGQSRFEQRLTSIALESGVCWQESLKGTNA
IGTALADQRVVSVIGDQHFIRQHRFISCSAGPVFGPTGALLGVLDITSEQQVHSEQVRML
IQTMVQQVENALLCQIPNGKFRVDIACDSALFDSGWQGIVIADAGGRILAKNAVATRLLA
QAKCAGEQLEALLARPQTGASAMMLPAGELVLNCQPLETSGHEPTPRSRVYSPSCPLHYG
DDQIEQAWQQACKLINKDISLLILGETGVGKGEFVKQLHRHSQRHAGPLVAVNCGALPQE
LIESELFGYAPGAFTGASKQGYHGKVRQADGGILFLDEIADMPLAAQCRLLHVLQEKEVV
PIGSNQAQQVDIQIIAATHKNLEQLVAEGLFRQDLYYRLNGLILTLPALRERQDRADLIA
AIHRQHRHQAQEICPHLMQLLSTYAWPGNIRELDNVLRVATLLSDHAAQLTLAHLPQHIA
TPLVQQSQPRTAQASGTGKDLRTTLSDTLLETYRANKGNISKTARMLGISRNTLYRKLRK
LGVRST
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcacccatttcccgagaccgatctatccccctggcgtgacaattggctggaacagtcc
tggcgccgcagtgaacaggccgggctggcgcaacaacaggcccctgagcatgtccggctg
gatcagcagcagttgtcagagcgtcagttccatgcccagggattgatccgggtggtcgag
caatgggccttgcccttgtttaatcagatgctggccggctccaacagccggttgctgctg
accgatcaggaaggggtgattatcggcgcctgggggcagtcgcgttttgaacagcggctg
accagtattgcgctggagtccggcgtatgctggcaggagagtcttaaaggcaccaatgcg
attggcaccgcgctggccgaccagcgggtggtctcggtgatcggggatcagcatttcatc
cgccagcaccggtttatcagctgttcggccgggccggtgttcgggccgaccggggcactg
ctgggggtgttagatatcaccagtgagcagcaagtgcattcggagcaagtccgcatgctg
atccagaccatggtgcagcaggttgagaatgcgctgttgtgccagatcccgaacggcaaa
ttccgggttgatatcgcctgtgattcagcactgtttgacagcggctggcaggggattgtg
attgctgatgccggcggtcggatcttggcaaaaaatgccgtggcgacccggttactggca
caggccaagtgtgccggggagcaactggaagcactgctggcgcgtccgcaaaccggggcc
agcgctatgatgcttccggccggagagctggtgctcaattgccagccgcttgaaacgtcc
ggccatgagccgacaccgcgttctcgggtgtattccccgtcttgtccgcttcattacggc
gatgatcagattgaacaggcctggcaacaggcgtgcaaactgatcaacaaagacatcagc
ctgctgatcctcggggaaaccggggtcggcaagggagaatttgtcaaacagctccaccgc
catagccagcgccatgccgggccactggtcgcggtcaattgcggtgcactgccgcaggag
ctgattgaatctgagttgttcggctatgcgccgggggcgtttaccggggccagcaaacag
ggctaccacggcaaagtgcgccaggccgatggcgggatattgttcctcgatgaaattgcc
gatatgccgttggccgctcagtgtcgtctgctgcacgtcctgcaggaaaaagaagtggta
ccgattggttcgaatcaggcacagcaagtcgatatccagatcatcgccgcgacccacaag
aacctggagcaactggtggctgaaggcttgttccgccaggatctctactaccggctcaat
ggcctgatcctgaccttgccggctttgcgcgagcgccaggaccgggcggatttgattgcg
gcaatccaccgtcagcaccggcaccaggcgcaggaaatctgtccgcatctgatgcagttg
ctgagtacttacgcttggccgggcaatattcgtgagctggacaacgtgttacgggtggcg
actttactgtccgatcatgccgcgcagctgacgctggcgcacctgccgcagcatattgcg
acgccgctggtgcagcagtcgcagccccggacggcacaagcgtcgggaaccggcaaagat
ctgcgtaccactctgtctgataccctgctcgagacctaccgcgccaacaaaggcaatatc
agcaagacggcccggatgctggggatcagccgcaataccctgtaccgcaaactcagaaag
cttggggtccgttcaacctaa
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