Photobacterium atrarenae: NNL38_21900
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Entry
NNL38_21900 CDS
T10583
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
pate Photobacterium atrarenae
Pathway
pate02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NNL38_21900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pate02000
]
NNL38_21900
Transporters [BR:
pate02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NNL38_21900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_30
AAA_21
AAA_16
AAA_24
RsgA_GTPase
AAA_23
DUF3987
P-loop_TraG
nSTAND1
MMR_HSR1
Rad17
AAA_15
AAA_5
Cytidylate_kin
AAA_28
Zeta_toxin
AAA_33
Motif
Other DBs
NCBI-ProteinID:
UTV29666
LinkDB
All DBs
Position
2:1305660..1307414
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AA seq
584 aa
AA seq
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MQADSILGVILRVIQRSERSSAQLLSGMIWRIAERLLDVLPMLVCFWWLQAVLMADVGGT
GEVTPSIAMVTALLVGIFSLQLFCAIHGQKNSFLGSYSIMGGYREKLLDRAHQLPLGALY
RYRTGQLTDMVTDDVLRVENIFTHLVIEVLTTLLIPVVLVAGLMWVDWQLALSLIIGMPF
AFWVLQVTRKLFVRMSQDKQAVYRDTSGLIVEFVSGIKTLRFYHRAELWLGKLYRHFDEM
IRMSIKVEQWGAVPVVLYRLLLELGLVVFFLIAANKIDAGSASPLTLLLFMLLAHRVISP
LLEMGQHLTILRYAVQCEGKLQGLYDEALLSEPEKAAGITEYSVCFDGVSFGYESMPVLH
NISFTARHQAVTAIVGPSGSGKSTVMNLLARFYDPDQGTIRVGGKDVKALGSEGLYQHIS
MVFQQVQLFDGTIMDNVRIGRPSASDEDVFAACKMAYCGEFINRLPAGYQTLIGESGASL
SGGERQRLSIARALLKDAPIILLDEATASVDAITQHYIQQALSELVKDKTVIMIAHRLST
IRDADQILVLDSGQLVQRGCHDELLKQEGLYQELWSAQNGVLTT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgatagtattttgggcgttattctgcgggtgattcaacgcagtgagcgttct
tccgcgcaactgttgagcggaatgatttggcgtattgccgagcgtttgctggatgtgtta
ccgatgctggtctgtttctggtggctgcaggctgtattgatggctgacgttggtggcact
ggcgaggtgacgccttcgatcgctatggtaacggcattgctggtgggtattttttctctt
cagctattttgtgcaatacatggacagaaaaatagctttctcggtagttattctatcatg
gggggatacagagagaagctacttgatcgggcgcaccagttgccgctgggcgcgctgtat
cgttatcgtaccggccagctgaccgatatggtgactgacgatgttctgcgggtcgaaaac
attttcacccatttggtgattgaggtactgactaccttattgatccccgtagtgctggtt
gcggggttgatgtgggttgattggcagctggcgctcagcctgattatcggtatgccgttt
gccttctgggtgttgcaggtgacacgcaagctgtttgtccggatgagccaggataaacaa
gcggtgtatcgcgatacatcaggtctgattgttgagtttgtgagtggcatcaagacgttg
cggttctatcatcgcgctgagctgtggctgggcaagctttatcgtcatttcgatgagatg
atccgtatgtcgattaaggttgagcaatggggggccgtcccggttgtgctttaccggctg
ttgcttgagctcgggttggtggtgtttttcctgattgcagcgaataagatagacgccggt
agcgcgagcccgttgacgttgctgctgtttatgctgcttgcccatcgcgtgatctctccc
ttgctcgaaatgggccagcatctgaccatactacgttatgcagtgcagtgtgaaggaaag
ctgcaagggctttatgatgaggcgttgttgagtgagcctgagaaagctgccgggatcacc
gagtattcagtttgtttcgacggggtgagttttggttatgagtcaatgccagtactgcac
aacataagttttactgcccggcaccaggccgtgacggcgattgtcgggccttccggtagc
ggcaagagcaccgtgatgaacctgctggcacgcttctacgatccggatcagggcactatc
agagtcgggggtaaagacgtcaaggcgttgggttctgaagggctttaccagcacatcagc
atggtattccagcaagtgcagttatttgacggcaccattatggacaatgtgcgcattggt
cggccgtcggccagcgatgaagatgtgtttgcagcttgtaaaatggcatattgtggagaa
ttcattaaccggttaccggcaggctatcagacactcattggtgagagtggagccagtttg
tctggtggtgagaggcagcgactttctattgcccgggcactgctgaaagatgcgccaatc
atcttgcttgatgaagccacagcctctgtcgatgccattactcagcactatatccagcaa
gcgttatccgagctggtgaaagataaaaccgtgattatgatagcccatcgcctgagcact
attcgggatgccgaccaaattttggtgctcgatagtgggcagttggttcagcgagggtgt
catgatgagttgcttaagcaagagggactatatcaggaattgtggtctgcccagaatggc
gtgctgacgacttag
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