Photobacterium atrarenae: NNL38_22305
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Entry
NNL38_22305 CDS
T10583
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pate Photobacterium atrarenae
Pathway
pate00550
Peptidoglycan biosynthesis
pate01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NNL38_22305 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pate01003
]
NNL38_22305 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pate01011
]
NNL38_22305 (mrcB)
Enzymes [BR:
pate01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NNL38_22305 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NNL38_22305 (mrcB)
Glycosyltransferases [BR:
pate01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NNL38_22305 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pate01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NNL38_22305 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Motif
Other DBs
NCBI-ProteinID:
UTV29744
LinkDB
All DBs
Position
2:1395995..1398349
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AA seq
784 aa
AA seq
DB search
MTTSKQKPNVQQPPTGDASRQGAFASPEPTPPPARPKKRLLKVCVLGMALLAGGGAWMGH
SLNQVVTDKFEGQLWQLPSVVYARELTLQPGALIRYEDLVNELETLKYRKVVNPTQSGEY
ATSRLKVEFIRRPFEFAEGEKAQQHVVVEFSYSKVKRIYEPESGREYGTFSVEPKLLGML
EAKTEEQRIYRAKEEMPQPLIDALIATEDRDFYQHDGVSPAAIARALVANLKAGRTVQGG
STLTQQLAKNMFLSSERSLWRKLKEAYMALIIDYRYSKDQILDAYLNQIYLAQAGADAIH
GFELGARFYFGLPLSELRIDQQALLVGLVKGPSYYNPWRYPERATARRNLVLRLMVENGK
LEQADYARAIKRPLDLQSKGQVAHRQPAYFGQLERELAQNVKDYRPGQGLRLFTTLDPDS
QAKAEQAVRKIIPQLEKRVGNELETAVVVADRLSGEIRAMVGGSRPGFDGFNRAVDARRP
IGSVVKPAVYLSALAQPERFSLATSLADRPLTLTGANGERWSPRNYDRQYRGQVPLYQAL
AKSYNVPTVNLGMAVGLDQVIETLDLLGIDRQEVPKLPSILLGAFTLTPVEVTQMYQTIA
SGGLKSELTALSSVVDSEGNILYQRIPKATRAVSEQASWLTLYAMQKVVTEGTARYLNSV
LPSSRLAGKTGTSDKGRDSWYVGMDGREVVTVWMGRDDNKSANLTGSSGPLRLYADYIQR
RDPEPLVLRTPAQVKDFTYQHNSMGGLQQACIGSTSLPAWDPKGLLKQTCVKQVEHFFQR
LFKW
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatccaaacaaaaaccgaatgtccaacaacccccgactggtgatgcatctcgt
cagggggcttttgcgtctcccgaaccgacaccaccgcccgctcgccccaaaaagcggttg
ctgaaagtgtgtgtattaggcatggcgttgttggccgggggtggtgcctggatgggccac
tcgctgaaccaggtggtgacggataaatttgaggggcaattgtggcaactaccgtctgtg
gtatacgcccgtgagctgacgttgcagcctggtgcgctgatccgatatgaagacctggtc
aatgaactggaaacacttaagtaccggaaagtcgtgaacccgacccaaagtggcgagtat
gcgaccagtcggctcaaggtggaattcatccgtcgtccgtttgaatttgcggaaggtgag
aaagcacagcagcacgtggtggtagagttcagttactcgaaggtcaaacgtatttacgag
ccggagagcggtcgcgagtacggcacgttcagcgttgagccgaaattgctcggcatgctg
gaagccaaaactgaggagcagcggatctatcgtgccaaagaggagatgccgcagccgttg
atcgatgccttgatagccactgaagatcgtgatttttaccagcatgacggcgtctcgccg
gctgccattgcccgggccctggtagccaacctcaaagctggtcggacagttcagggcggc
agcacactcacccaacagctggccaagaatatgtttctcagtagcgagcgaagtttgtgg
cggaaactcaaagaagcctatatggcgctgatcattgattatcgctacagcaaagatcag
atcctggatgcctacctgaaccaaatctatctggctcaggcgggcgcagatgctatccac
ggctttgaactgggcgcgcggttttactttggcctgccgctttctgagctgcgcattgat
cagcaggcgttgttggttggcctggtcaaaggtccttcttattacaatccctggcgttat
ccggagcgggcaacagcgcggagaaatctggttctgcgcctgatggttgagaatggcaaa
cttgagcaggcagactatgcgcgagccatcaagcgcccgttggatttgcagtctaaaggc
caggtggcgcaccgtcagccggcttactttgggcaactggagcgggagttggcgcagaat
gtcaaagattaccgtcccggtcagggcttacgtttgttcactacgctcgatccggactcg
caagctaaagcggagcaggcggtgcggaagatcatcccgcaactggaaaagcgggtcggc
aacgaactggaaactgcagtggtggtggccgatcgcctgagtggtgaaatccgcgccatg
gttggcggcagtcgtccggggttcgatggttttaaccgggctgtggatgcccggcggccg
attggctctgtggtcaaacctgcggtgtatttatccgcattggcgcaaccggagcggttc
tcgctggcaacctccctggccgatcgtccactgacgctcaccggcgcgaatggtgagcgc
tggtcgccgcgtaattatgatcgccagtaccgcggtcaggtacctttgtatcaggcactt
gccaaatcgtataacgtgccgaccgtaaatctcggtatggctgtcggacttgatcaggtg
attgagacgctggacttgcttgggattgatcgccaggaagtgccgaaattgccgtccatt
ttgttgggggcctttactctgaccccggttgaggtaacccagatgtatcagaccattgcc
agcggcgggctgaaaagcgagctgacggcgctgagctcggtggttgatagtgaaggaaac
atcctttatcagcgtattccgaaagcgacccgggcggtctcggagcaggcatcctggctg
accttgtacgccatgcagaaagtggtcactgaagggaccgcccgttatctgaattcggtg
ttaccgtcatctcgtttggccggcaagaccgggacttccgataaaggacgggacagctgg
tatgttggcatggatggccgggaagtggtgaccgtttggatgggacgggatgataacaag
agtgcaaatctcaccggatcatccggtcccctgcgtttgtatgccgactatatccagcgt
cgggatccggagcctctggtgctgcgcacgcctgcgcaggtgaaagactttacctatcag
cacaattcgatggggggactccagcaggcatgtatcggttcgactagtttaccagcatgg
gatccaaaaggcttactcaagcaaacctgcgtcaaacaggtcgagcacttctttcagcgc
ttgttcaagtggtaa
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