Photobacterium atrarenae: NNL38_23005
Help
Entry
NNL38_23005 CDS
T10583
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pate Photobacterium atrarenae
Brite
Enzymes [BR:
pate01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NNL38_23005
Transfer RNA biogenesis [BR:
pate03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NNL38_23005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UTV29877
LinkDB
All DBs
Position
2:complement(1583572..1585596)
Genome browser
AA seq
674 aa
AA seq
DB search
MFQDNPLLAQLKKQIQETLPKKEGTIKATDRGFGFLEIDNSKDSFFIPPNYMKNVMHGDR
VIAVIRTEKEREVAEPQELVEQFMTRFIGRIKLIRDRLHVVPDHPQLKDAIKARAMKGLN
PELLKEGDWVVANMTRHPLVGDNKTFFCEVKEKITDSNDKIAPWWVTLARHNLPNAEPAP
QDSWNMLEEGLERRDLTALPFITIDGESTKDMDDALYTVAKEDGSFELTVAIADPTSYIE
VGDQMDKEARQRGFTIYLPGRNIPMLPRELSDELCSLMEGEKRPALCCQVTIDKDGVIQD
DIEFFAAWIQSQGRLSYDNVSDLLEHGNAEGWAPSEVIRQQIDALHGFANARSDWRANNA
VVFPDRPDYRFELSEDNDVVAIHTDPRRTANRMIEEAMITANICAGRVLQDKFGFGVYNY
HNGFNPEKLDTAMEFLTEAGAPFEKEQLLSLDGFSALRRWLNAQETTYLDNRLRKFQAYS
EVGNKPAPHYAMGLDVYATWTSPIRKYGDMINHRLLKAIISGQEPSQIPDDEVGEEIANH
RRHHRMAERDVADWLYVRLLKDAVKEETVFTAEVFDINRAGMRVRLIENGAAAFIPGPLI
LDNKKRIECNGDLGIISIDNVREFQLGDIFEVKLAEVRAATRQLVAKPVKAFPPLVEAQQ
ADEPQSEQPAEEKA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaatccactattagcacagctaaaaaagcaaattcaggaaacgctgccg
aagaaagaaggcaccattaaagccacggaccgcggctttggttttctggagattgacaac
agcaaagacagctttttcattccgccgaactacatgaaaaacgtcatgcacggcgatcgt
gtcattgccgtgattcggactgaaaaagagcgtgaagttgcagagccgcaggagctggtc
gagcaatttatgactcgctttatcggccgcatcaaactgatccgcgatcgtcttcatgtt
gtgccggatcacccgcagctcaaagatgcgattaaagcccgtgccatgaaaggcctgaac
ccggagttgctgaaagaaggcgactgggttgttgcgaacatgacgcgtcacccgctggtc
ggcgacaacaaaactttcttctgcgaagtgaaagaaaagatcaccgacagcaatgataaa
attgctccatggtgggttaccctggcccgtcataacctgccaaatgccgagccggcaccg
caggacagttggaacatgctggaagaaggcctggagcgtcgtgacctgaccgctctgcca
ttcattacgattgatggtgaatcgaccaaagatatggacgatgcactctatacggttgcg
aaagaagacggtagcttcgaactcaccgttgcgattgccgatccaacctcttatatcgag
gttggcgatcagatggataaagaagcgcgccaacgtggctttaccatttacctgccgggc
cgtaacatcccgatgctaccacgtgagctgagcgatgagctgtgctctctgatggagggc
gaaaagcgccctgcactatgctgccaggtgaccatcgacaaagatggtgtgattcaggac
gacattgaattctttgctgcctggatccagtcccagggccgcctctcttacgacaacgtc
tctgacctgctggagcacggcaatgcagaaggttgggcgccaagcgaggtgatccgtcag
caaattgatgccctgcacggttttgctaacgcccgtagcgactggcgtgccaacaacgcc
gtggtcttcccggaccgtccggattaccgctttgagctgagcgaagacaacgatgtggtc
gcgattcatacagatccgcgccgcactgcgaaccgcatgattgaagaagccatgatcacc
gccaacatctgtgccggccgtgtgcttcaggacaagtttggctttggggtgtacaactac
cacaacggctttaatccggaaaaactggataccgcgatggagttcctgaccgaagccggg
gcaccattcgaaaaagagcaactgctgagcctggatggcttcagtgccctgcgccgctgg
ctgaacgcacaagaaaccacttacctggacaaccgtctgcgtaagttccaggcctacagc
gaagttggtaacaaaccggcgccgcattacgccatgggtctggatgtctacgcgacctgg
acatcgccaatccgtaagtacggcgatatgatcaaccaccgcctgctgaaagccattatc
agcggacaggagccgagccagatccccgatgatgaagtgggcgaggaaattgccaaccac
cgtcgtcatcaccgtatggcagagcgcgatgttgccgactggctgtatgtacgcctactg
aaagacgccgtcaaagaagagactgtctttaccgcagaagtcttcgacatcaaccgtgcc
gggatgcgtgtccgcctgattgaaaacggggcagcggcgtttattccgggtccgctgatc
ctggacaacaagaagcgcatcgaatgtaacggtgatctggggatcattagcatcgataac
gtccgcgagttccagctcggcgacatatttgaagtgaagttggctgaagtacgtgctgca
acacgccagctggttgccaaaccggtcaaagcgttcccgccacttgttgaagcgcaacaa
gcggatgaaccacagtctgagcaaccggcagaagagaaagcctaa
DBGET
integrated database retrieval system
