Photobacterium atrarenae: NNL38_23235
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Entry
NNL38_23235 CDS
T10583
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pate Photobacterium atrarenae
Pathway
pate00260
Glycine, serine and threonine metabolism
pate00630
Glyoxylate and dicarboxylate metabolism
pate00670
One carbon pool by folate
pate00785
Lipoic acid metabolism
pate01100
Metabolic pathways
pate01110
Biosynthesis of secondary metabolites
pate01200
Carbon metabolism
Module
pate_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NNL38_23235 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NNL38_23235 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NNL38_23235 (gcvP)
00670 One carbon pool by folate
NNL38_23235 (gcvP)
Enzymes [BR:
pate01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NNL38_23235 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UTV29918
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All DBs
Position
2:complement(1627850..1630729)
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AA seq
959 aa
AA seq
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MTDMTLLNALSDDKEFAGRHNGPDSAQQKTMLETIGVASVDQLIEETVPAAIRLPEPMKL
DQPLSEADLLASLKAIASKNVINRSYIGQGYYNTFTPNVILRNVLENPGWYTAYTPYQPE
ISQGRLESLLNYQQMIMDLTGMELANASLLDEATAAAEAMTLCQRAGKSKSKAFFVSDDL
HPQTIDVVRTRAGYIGIEIISGSIDELDSHDVFGALLQYPGTTGRVVDLSDVIEKAHAKK
TLVAVASDLLALTVLKSPGEMGADVVIGSAQRFGVPMGFGGPHAGFMATKDKHKRTMPGR
VIGVSKDSKDNPALRMAMQTREQHIRREKATSNICTAQALLANMAAFYALYHGPEGLRKI
GRRVHHLTAILAAGLRNSGIELANDSFFDTLTLNTGKKTNEFYKKALDAGINLRKYDNQL
GISLDETTKVEDVEELLALFSGDELKASMFTADIAADEFAAIPESCRRTSKYLTHPVFSA
YHSESLMMRYMKKLENKDYSLTHGMIPLGSCTMKLNAAAEMIPITWPEFGALHPFAPADQ
AKGYAELTDKLSEMLCSVTGYDAFSLQPNSGAQGEYAGLIAIQRYHEANGDSHRNVCLIP
SSAHGTNPASAAMVSMKVVVVGCDEQGNIDVDDLKAKIEKHRDNLSCIMITYPSTHGVYE
ETVQEVCELVHEAGGQVYLDGANMNAQVGLTNPGFIGSDVSHLNLHKTFCIPHGGGGPGM
GPIGVKSHLAPFLPGHVESSENDNKQFAVSAANFGSASILPISYAYIAMMGESGLTEATK
LAILNANYIMERLRPHYPVLYRGTHGRVAHECIIDIRPIKEASGISEEDVAKRLMDYGFH
APTMSFPVAGTLMIEPTESEDLAELDRFCDAMIAIRHEIARVQDGEWDLKDNPLVNAPHT
QADLMEAEWNRSYSRELGCFPSAQTKAAKYWPTVNRVDNVFGDRNLVCSCPGIENYMED
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatgactcttctaaatgcattaagcgatgataaggaattcgctggccgccac
aatggcccggattcagcacaacaaaaaactatgctggaaacaattggtgttgccagcgtc
gatcagcttattgaggaaaccgtcccggcagccatccgcctgccagagccgatgaagctg
gatcagccgctcagcgaagctgatctgctggcttctctgaaagcgattgcaagcaagaac
gtgattaaccgtagttatatcggtcagggttactacaacactttcacaccgaacgtcatt
ctgcgcaatgtcctggaaaacccgggctggtacaccgcttatactccttatcagccggaa
atctcccagggccgcttggagtctctgctgaactaccagcagatgatcatggatctgacc
ggtatggaactggcgaatgcctccctgctggatgaagcgaccgctgcagccgaagccatg
accctgtgtcagcgtgccggtaagagcaagagcaaagccttcttcgtttctgacgacctg
cacccacaaaccattgacgtggttcgcacccgtgccggctacatcggcattgagatcatc
agcggttcaatcgacgagctggacagccacgacgtgtttggtgccctgctacaatacccg
ggcacaaccggccgggtcgttgacctgagcgacgtgattgaaaaagcccatgcgaagaaa
accctggttgcagttgcctctgatctgctggctctgacggtgctgaagtcgccaggtgaa
atgggcgcggatgtcgtgatcggttcagcccagcgcttcggcgtaccgatgggctttggc
ggtccacacgccggcttcatggcgaccaaagacaagcacaagcgaaccatgccaggtcgt
gtgattggtgtttccaaagacagcaaagacaacccggccctgcgcatggcgatgcaaacc
cgtgagcagcatatccgtcgtgagaaagcgacctcaaatatctgtactgcgcaggcactg
ctggccaacatggctgcgttctacgccctgtaccacggtcctgaaggtctgcgtaagatc
ggccgtcgcgttcaccacctgaccgcgatcctggccgccggcctgcgtaactcaggcatt
gaactggcgaacgacagcttcttcgataccctgacgctgaacacaggtaagaaaacaaac
gaattctacaaaaaagcgctggatgcgggcatcaacctgcgtaaatacgacaatcagctg
ggcatcagcctggatgagaccactaaggttgaagatgtcgaagaactgctggccctgttc
agcggtgacgagctgaaggcgtcgatgttcaccgcagatatcgccgcggatgagttcgca
gccattccggaaagctgccgtcgtaccagcaagtacctgacccaccctgttttcagcgcg
tatcacagcgaaagcctgatgatgcgttacatgaaaaagctggaaaacaaagactactca
ctgacccacggcatgattccgctgggcagctgtaccatgaagctcaatgctgcggccgag
atgatcccaatcacctggccggaatttggagccctgcacccgttcgcgccggccgaccag
gccaaaggctacgctgagctgactgacaagctgtctgaaatgctgtgctccgtaaccggc
tacgatgctttctccttgcagccgaactctggtgcacaaggtgaatacgccggtctgatc
gcgattcagcgttaccatgaagccaacggcgacagccaccgcaacgtgtgcctgatccca
agctcagctcacgggacgaacccggcttctgcggccatggtctcaatgaaagttgtagtc
gttggctgtgatgagcaaggcaacatcgatgttgacgatctgaaagcgaagatcgaaaaa
caccgtgataacctgtcgtgcatcatgatcacctacccgtcgacgcacggcgtgtacgaa
gaaacagttcaggaagtctgtgaactggttcatgaagccggcggtcaggtctatctggac
ggcgccaacatgaacgcccaggttggcctgaccaaccctggcttcatcggctctgacgtt
tcgcacctgaacctgcacaagaccttctgcatcccgcacggtggtggcggtccgggcatg
ggtccgattggtgtgaaatctcacctggcaccattcctgccgggccacgttgagagctca
gaaaacgacaacaagcagtttgccgtctctgctgcaaacttcggctccgcgtcgattctg
ccaatctcttacgcctacatcgcgatgatgggtgaaagcggcctgaccgaagcgaccaag
ctggcgatcctgaacgccaactacatcatggagcgtctgcgtccgcactacccggttctg
taccgtggtacccatggccgcgtcgcccacgagtgtattatcgacattcgcccaatcaaa
gaagcgtccggcatcagcgaagaagatgttgccaagcgtctgatggactacggtttccac
gcaccgaccatgtccttcccggttgccggtactctgatgatcgaaccaaccgagtcagaa
gatctggccgagctggatcgcttctgtgacgcgatgattgccatccgccatgaaatcgcc
cgcgtccaggacggcgagtgggatctgaaagacaacccgctggtcaacgcaccgcacacc
caggcggatctgatggaagccgagtggaatcgcagctacagccgcgagctgggttgcttc
ccgtcagcgcagaccaaagcagccaagtactggccgaccgtcaaccgcgtcgacaacgtg
tttggtgatcggaacctggtctgctcatgcccaggcatcgagaactacatggaagactaa
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