Photobacterium atrarenae: NNL38_24180
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Entry
NNL38_24180 CDS
T10583
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
pate Photobacterium atrarenae
Pathway
pate00540
Lipopolysaccharide biosynthesis
pate01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NNL38_24180
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pate01005
]
NNL38_24180
Lipopolysaccharide biosynthesis proteins [BR:
pate01005
]
Lipid A
NNL38_24180
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
UTV30090
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All DBs
Position
2:1835584..1836645
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AA seq
353 aa
AA seq
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MLRVVFITHMLLLSPVTFAGNSGSVSVTLDNDGILGADKNYTHGFFASYHTPASSAFQQR
LPSALAYGADALLSNRLLFDDQSLKGWSARLGYQIWTPATLSSDVPLAGERPYAGLLFVE
AALYQFSMTRSDTLQVMVGTLGPHALAKEGQSVTHNLIGSEQPQGWDYQIDNQPVFTLSY
QSNRRFLHGQLNHSQTRHHLEDQTSDRRLSIVRYDLSYTGRVSIGNYQTEVAAGLIARLG
TDLNSPSGSITFESGHGFNPGMRVSHSPDQFLFMGLEGRRQFTDLTIEGTRHSHQVPIPP
TTLEPWQASLQFGGAYLLPDWGAVASLTLNTPDFQQDSQNGYAWGSLMVFLHW
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtgttgtatttatcactcacatgctccttttatcacctgtgacttttgctggc
aactcgggcagtgtgtccgttactttggataatgacggcatactcggagcggacaagaac
tatacccatggtttctttgccagttaccacacccctgccagcagcgctttccagcaacgg
ctaccctcggccctggcttacggagctgacgcgctgctgtccaatcgtctgctctttgat
gatcaaagcctgaaaggctggagcgctcggctcggttaccaaatctggacccccgcaacc
ctgtccagtgatgtcccgcttgctggcgagcggccttatgccggattactgtttgtcgag
gctgcgctctatcaattctctatgacaaggtcagataccctgcaagtcatggtgggaacc
cttggcccgcatgcgcttgccaaggaaggacagagtgtgacccacaatctgattggctca
gaacagccccaaggctgggattatcaaattgacaatcaaccggtattcaccctgagctac
cagagcaatcggcggtttcttcatggccagctgaaccattcacagacaagacatcacctg
gaagatcaaacctcggacagacgactctccatcgttcgttacgatctgagctataccggc
cgggtgagcatcggaaactatcaaaccgaagttgccgccggcctgatcgcgcgactcggt
actgacctgaacagcccgagcggcagcattacctttgagtccggacatggcttcaacccc
ggtatgcgggtttctcacagccccgaccaattcctgttcatgggcctggaaggacgtcgc
cagttcacagacctgacgatcgaaggcacccgccacagccatcaagtgccaattccccca
acaactctcgagccctggcaagcaagcctgcagtttggtggcgcctatttgctgccagac
tggggggctgtcgcgagccttacgttgaataccccagactttcagcaggacagtcaaaac
ggatacgcttggggatcactcatggtattcttgcactggtga
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