PATHWAY: aem01100 Help Entry aem01100                    Pathway                                 Name Metabolic pathways - Aeromonas sp. CU5 Class BRITE hierarchy Pathway map aem01100   Metabolic pathways Module aem_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:aem01100] aem_M00002   Glycolysis, core module involving three-carbon compounds [PATH:aem01100] aem_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:aem01100] aem_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:aem01100] aem_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:aem01100] aem_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:aem01100] aem_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:aem01100] aem_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:aem01100] aem_M00012   Glyoxylate cycle [PATH:aem01100] aem_M00015   Proline biosynthesis, glutamate => proline [PATH:aem01100] aem_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:aem01100] aem_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:aem01100] aem_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:aem01100] aem_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:aem01100] aem_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:aem01100] aem_M00021   Cysteine biosynthesis, serine => cysteine [PATH:aem01100] aem_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:aem01100] aem_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:aem01100] aem_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:aem01100] aem_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:aem01100] aem_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:aem01100] aem_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:aem01100] aem_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:aem01100] aem_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:aem01100] aem_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:aem01100] aem_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:aem01100] aem_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:aem01100] aem_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:aem01100] aem_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:aem01100] aem_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:aem01100] aem_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:aem01100] aem_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:aem01100] aem_M00063   CMP-KDO biosynthesis [PATH:aem01100] aem_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:aem01100] aem_M00082   Fatty acid biosynthesis, initiation [PATH:aem01100] aem_M00083   Fatty acid biosynthesis, elongation [PATH:aem01100] aem_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:aem01100] aem_M00087   beta-Oxidation [PATH:aem01100] aem_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:aem01100] aem_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:aem01100] aem_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:aem01100] aem_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:aem01100] aem_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:aem01100] aem_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:aem01100] aem_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:aem01100] aem_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:aem01100] aem_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:aem01100] aem_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:aem01100] aem_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:aem01100] aem_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:aem01100] aem_M00140   C1-unit interconversion, prokaryotes [PATH:aem01100] aem_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:aem01100] aem_M00149   Succinate dehydrogenase, prokaryotes [PATH:aem01100] aem_M00150   Fumarate reductase, prokaryotes [PATH:aem01100] aem_M00151   Cytochrome bc1 complex respiratory unit [PATH:aem01100] aem_M00156   Cytochrome c oxidase, cbb3-type [PATH:aem01100] aem_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:aem01100] aem_M00168   CAM (Crassulacean acid metabolism), dark [PATH:aem01100] aem_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:aem01100] aem_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:aem01100] aem_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:aem01100] aem_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:aem01100] aem_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:aem01100] aem_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:aem01100] aem_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:aem01100] aem_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:aem01100] aem_M00621   Glycine cleavage system [PATH:aem01100] aem_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:aem01100] aem_M00793   dTDP-L-rhamnose biosynthesis [PATH:aem01100] aem_M00844   Arginine biosynthesis, ornithine => arginine [PATH:aem01100] aem_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:aem01100] aem_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:aem01100] aem_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:aem01100] aem_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:aem01100] aem_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:aem01100] aem_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:aem01100] aem_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:aem01100] aem_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:aem01100] aem_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:aem01100] aem_M00970   Proline degradation, proline => glutamate [PATH:aem01100] Organism Aeromonas sp. CU5 [GN:aem] Related pathway aem00010   Glycolysis / Gluconeogenesis aem00020   Citrate cycle (TCA cycle) aem00030   Pentose phosphate pathway aem00040   Pentose and glucuronate interconversions aem00051   Fructose and mannose metabolism aem00052   Galactose metabolism aem00053   Ascorbate and aldarate metabolism aem00061   Fatty acid biosynthesis aem00071   Fatty acid degradation aem00130   Ubiquinone and other terpenoid-quinone biosynthesis aem00190   Oxidative phosphorylation aem00220   Arginine biosynthesis aem00230   Purine metabolism aem00240   Pyrimidine metabolism aem00250   Alanine, aspartate and glutamate metabolism aem00260   Glycine, serine and threonine metabolism aem00261   Monobactam biosynthesis aem00270   Cysteine and methionine metabolism aem00280   Valine, leucine and isoleucine degradation aem00290   Valine, leucine and isoleucine biosynthesis aem00300   Lysine biosynthesis aem00310   Lysine degradation aem00330   Arginine and proline metabolism aem00332   Carbapenem biosynthesis aem00340   Histidine metabolism aem00350   Tyrosine metabolism aem00360   Phenylalanine metabolism aem00362   Benzoate degradation aem00380   Tryptophan metabolism aem00400   Phenylalanine, tyrosine and tryptophan biosynthesis aem00401   Novobiocin biosynthesis aem00410   beta-Alanine metabolism aem00430   Taurine and hypotaurine metabolism aem00450   Selenocompound metabolism aem00460   Cyanoamino acid metabolism aem00470   D-Amino acid metabolism aem00480   Glutathione metabolism aem00500   Starch and sucrose metabolism aem00511   Other glycan degradation aem00520   Amino sugar and nucleotide sugar metabolism aem00521   Streptomycin biosynthesis aem00523   Polyketide sugar unit biosynthesis aem00525   Acarbose and validamycin biosynthesis aem00540   Lipopolysaccharide biosynthesis aem00541   O-Antigen nucleotide sugar biosynthesis aem00543   Exopolysaccharide biosynthesis aem00550   Peptidoglycan biosynthesis aem00552   Teichoic acid biosynthesis aem00561   Glycerolipid metabolism aem00562   Inositol phosphate metabolism aem00564   Glycerophospholipid metabolism aem00592   alpha-Linolenic acid metabolism aem00600   Sphingolipid metabolism aem00620   Pyruvate metabolism aem00625   Chloroalkane and chloroalkene degradation aem00626   Naphthalene degradation aem00627   Aminobenzoate degradation aem00630   Glyoxylate and dicarboxylate metabolism aem00633   Nitrotoluene degradation aem00640   Propanoate metabolism aem00643   Styrene degradation aem00650   Butanoate metabolism aem00660   C5-Branched dibasic acid metabolism aem00670   One carbon pool by folate aem00680   Methane metabolism aem00710   Carbon fixation by Calvin cycle aem00720   Other carbon fixation pathways aem00730   Thiamine metabolism aem00740   Riboflavin metabolism aem00750   Vitamin B6 metabolism aem00760   Nicotinate and nicotinamide metabolism aem00770   Pantothenate and CoA biosynthesis aem00780   Biotin metabolism aem00785   Lipoic acid metabolism aem00790   Folate biosynthesis aem00860   Porphyrin metabolism aem00900   Terpenoid backbone biosynthesis aem00907   Pinene, camphor and geraniol degradation aem00910   Nitrogen metabolism aem00920   Sulfur metabolism aem00930   Caprolactam degradation aem00999   Biosynthesis of various plant secondary metabolites aem01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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