KEGG   PATHWAY: agc01100
Entry
agc01100                    Pathway                                
Name
Metabolic pathways - Agrobacterium sp. RAC06
Class
Pathway map
agc01100  Metabolic pathways
agc01100

Module
agc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:agc01100]
agc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:agc01100]
agc_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:agc01100]
agc_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:agc01100]
agc_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:agc01100]
agc_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:agc01100]
agc_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:agc01100]
agc_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:agc01100]
agc_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:agc01100]
agc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:agc01100]
agc_M00012  Glyoxylate cycle [PATH:agc01100]
agc_M00015  Proline biosynthesis, glutamate => proline [PATH:agc01100]
agc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:agc01100]
agc_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:agc01100]
agc_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:agc01100]
agc_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:agc01100]
agc_M00021  Cysteine biosynthesis, serine => cysteine [PATH:agc01100]
agc_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:agc01100]
agc_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:agc01100]
agc_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:agc01100]
agc_M00026  Histidine biosynthesis, PRPP => histidine [PATH:agc01100]
agc_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:agc01100]
agc_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:agc01100]
agc_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:agc01100]
agc_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:agc01100]
agc_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:agc01100]
agc_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:agc01100]
agc_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:agc01100]
agc_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:agc01100]
agc_M00082  Fatty acid biosynthesis, initiation [PATH:agc01100]
agc_M00083  Fatty acid biosynthesis, elongation [PATH:agc01100]
agc_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:agc01100]
agc_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:agc01100]
agc_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:agc01100]
agc_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:agc01100]
agc_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:agc01100]
agc_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:agc01100]
agc_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:agc01100]
agc_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:agc01100]
agc_M00140  C1-unit interconversion, prokaryotes [PATH:agc01100]
agc_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:agc01100]
agc_M00149  Succinate dehydrogenase, prokaryotes [PATH:agc01100]
agc_M00151  Cytochrome bc1 complex respiratory unit [PATH:agc01100]
agc_M00155  Cytochrome c oxidase, prokaryotes [PATH:agc01100]
agc_M00156  Cytochrome c oxidase, cbb3-type [PATH:agc01100]
agc_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:agc01100]
agc_M00169  CAM (Crassulacean acid metabolism), light [PATH:agc01100]
agc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:agc01100]
agc_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:agc01100]
agc_M00417  Cytochrome o ubiquinol oxidase [PATH:agc01100]
agc_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:agc01100]
agc_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:agc01100]
agc_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:agc01100]
agc_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:agc01100]
agc_M00555  Betaine biosynthesis, choline => betaine [PATH:agc01100]
agc_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:agc01100]
agc_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:agc01100]
agc_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:agc01100]
agc_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:agc01100]
agc_M00621  Glycine cleavage system [PATH:agc01100]
agc_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:agc01100]
agc_M00844  Arginine biosynthesis, ornithine => arginine [PATH:agc01100]
agc_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:agc01100]
agc_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:agc01100]
agc_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:agc01100]
agc_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:agc01100]
agc_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:agc01100]
agc_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:agc01100]
agc_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:agc01100]
agc_M00970  Proline degradation, proline => glutamate [PATH:agc01100]
agc_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:agc01100]
Organism
Agrobacterium sp. RAC06 [GN:agc]
Related
pathway
agc00010  Glycolysis / Gluconeogenesis
agc00020  Citrate cycle (TCA cycle)
agc00030  Pentose phosphate pathway
agc00040  Pentose and glucuronate interconversions
agc00051  Fructose and mannose metabolism
agc00052  Galactose metabolism
agc00053  Ascorbate and aldarate metabolism
agc00061  Fatty acid biosynthesis
agc00071  Fatty acid degradation
agc00130  Ubiquinone and other terpenoid-quinone biosynthesis
agc00190  Oxidative phosphorylation
agc00220  Arginine biosynthesis
agc00230  Purine metabolism
agc00240  Pyrimidine metabolism
agc00250  Alanine, aspartate and glutamate metabolism
agc00260  Glycine, serine and threonine metabolism
agc00261  Monobactam biosynthesis
agc00270  Cysteine and methionine metabolism
agc00280  Valine, leucine and isoleucine degradation
agc00290  Valine, leucine and isoleucine biosynthesis
agc00300  Lysine biosynthesis
agc00310  Lysine degradation
agc00330  Arginine and proline metabolism
agc00332  Carbapenem biosynthesis
agc00340  Histidine metabolism
agc00350  Tyrosine metabolism
agc00360  Phenylalanine metabolism
agc00361  Chlorocyclohexane and chlorobenzene degradation
agc00362  Benzoate degradation
agc00364  Fluorobenzoate degradation
agc00380  Tryptophan metabolism
agc00400  Phenylalanine, tyrosine and tryptophan biosynthesis
agc00401  Novobiocin biosynthesis
agc00410  beta-Alanine metabolism
agc00430  Taurine and hypotaurine metabolism
agc00440  Phosphonate and phosphinate metabolism
agc00450  Selenocompound metabolism
agc00460  Cyanoamino acid metabolism
agc00470  D-Amino acid metabolism
agc00480  Glutathione metabolism
agc00500  Starch and sucrose metabolism
agc00511  Other glycan degradation
agc00520  Amino sugar and nucleotide sugar metabolism
agc00521  Streptomycin biosynthesis
agc00540  Lipopolysaccharide biosynthesis
agc00541  O-Antigen nucleotide sugar biosynthesis
agc00543  Exopolysaccharide biosynthesis
agc00550  Peptidoglycan biosynthesis
agc00552  Teichoic acid biosynthesis
agc00561  Glycerolipid metabolism
agc00562  Inositol phosphate metabolism
agc00564  Glycerophospholipid metabolism
agc00600  Sphingolipid metabolism
agc00620  Pyruvate metabolism
agc00622  Xylene degradation
agc00623  Toluene degradation
agc00625  Chloroalkane and chloroalkene degradation
agc00626  Naphthalene degradation
agc00627  Aminobenzoate degradation
agc00630  Glyoxylate and dicarboxylate metabolism
agc00633  Nitrotoluene degradation
agc00640  Propanoate metabolism
agc00643  Styrene degradation
agc00650  Butanoate metabolism
agc00660  C5-Branched dibasic acid metabolism
agc00670  One carbon pool by folate
agc00680  Methane metabolism
agc00730  Thiamine metabolism
agc00740  Riboflavin metabolism
agc00750  Vitamin B6 metabolism
agc00760  Nicotinate and nicotinamide metabolism
agc00770  Pantothenate and CoA biosynthesis
agc00780  Biotin metabolism
agc00785  Lipoic acid metabolism
agc00790  Folate biosynthesis
agc00791  Atrazine degradation
agc00860  Porphyrin metabolism
agc00900  Terpenoid backbone biosynthesis
agc00906  Carotenoid biosynthesis
agc00907  Pinene, camphor and geraniol degradation
agc00910  Nitrogen metabolism
agc00920  Sulfur metabolism
agc00930  Caprolactam degradation
agc00946  Degradation of flavonoids
agc00996  Biosynthesis of various alkaloids
agc00999  Biosynthesis of various plant secondary metabolites
agc01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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