KEGG   PATHWAY: amal01100
Entry
amal01100                   Pathway                                
Name
Metabolic pathways - Alteromonas mediterranea U4
Class
Pathway map
amal01100  Metabolic pathways
amal01100

Module
amal_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:amal01100]
amal_M00002  Glycolysis, core module involving three-carbon compounds [PATH:amal01100]
amal_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:amal01100]
amal_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:amal01100]
amal_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:amal01100]
amal_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:amal01100]
amal_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:amal01100]
amal_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:amal01100]
amal_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:amal01100]
amal_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:amal01100]
amal_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:amal01100]
amal_M00012  Glyoxylate cycle [PATH:amal01100]
amal_M00015  Proline biosynthesis, glutamate => proline [PATH:amal01100]
amal_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:amal01100]
amal_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:amal01100]
amal_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:amal01100]
amal_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:amal01100]
amal_M00021  Cysteine biosynthesis, serine => cysteine [PATH:amal01100]
amal_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:amal01100]
amal_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:amal01100]
amal_M00026  Histidine biosynthesis, PRPP => histidine [PATH:amal01100]
amal_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:amal01100]
amal_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:amal01100]
amal_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:amal01100]
amal_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:amal01100]
amal_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:amal01100]
amal_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:amal01100]
amal_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:amal01100]
amal_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:amal01100]
amal_M00063  CMP-KDO biosynthesis [PATH:amal01100]
amal_M00082  Fatty acid biosynthesis, initiation [PATH:amal01100]
amal_M00083  Fatty acid biosynthesis, elongation [PATH:amal01100]
amal_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:amal01100]
amal_M00087  beta-Oxidation [PATH:amal01100]
amal_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:amal01100]
amal_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:amal01100]
amal_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:amal01100]
amal_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:amal01100]
amal_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:amal01100]
amal_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:amal01100]
amal_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:amal01100]
amal_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:amal01100]
amal_M00149  Succinate dehydrogenase, prokaryotes [PATH:amal01100]
amal_M00151  Cytochrome bc1 complex respiratory unit [PATH:amal01100]
amal_M00155  Cytochrome c oxidase, prokaryotes [PATH:amal01100]
amal_M00156  Cytochrome c oxidase, cbb3-type [PATH:amal01100]
amal_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:amal01100]
amal_M00168  CAM (Crassulacean acid metabolism), dark [PATH:amal01100]
amal_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:amal01100]
amal_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:amal01100]
amal_M00417  Cytochrome o ubiquinol oxidase [PATH:amal01100]
amal_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:amal01100]
amal_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:amal01100]
amal_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:amal01100]
amal_M00555  Betaine biosynthesis, choline => betaine [PATH:amal01100]
amal_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:amal01100]
amal_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:amal01100]
amal_M00621  Glycine cleavage system [PATH:amal01100]
amal_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:amal01100]
amal_M00793  dTDP-L-rhamnose biosynthesis [PATH:amal01100]
amal_M00844  Arginine biosynthesis, ornithine => arginine [PATH:amal01100]
amal_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:amal01100]
amal_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:amal01100]
amal_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:amal01100]
amal_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:amal01100]
amal_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:amal01100]
amal_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:amal01100]
amal_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:amal01100]
amal_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:amal01100]
Organism
Alteromonas mediterranea U4 [GN:amal]
Related
pathway
amal00010  Glycolysis / Gluconeogenesis
amal00020  Citrate cycle (TCA cycle)
amal00030  Pentose phosphate pathway
amal00040  Pentose and glucuronate interconversions
amal00051  Fructose and mannose metabolism
amal00052  Galactose metabolism
amal00053  Ascorbate and aldarate metabolism
amal00061  Fatty acid biosynthesis
amal00071  Fatty acid degradation
amal00130  Ubiquinone and other terpenoid-quinone biosynthesis
amal00190  Oxidative phosphorylation
amal00220  Arginine biosynthesis
amal00230  Purine metabolism
amal00240  Pyrimidine metabolism
amal00250  Alanine, aspartate and glutamate metabolism
amal00260  Glycine, serine and threonine metabolism
amal00261  Monobactam biosynthesis
amal00270  Cysteine and methionine metabolism
amal00280  Valine, leucine and isoleucine degradation
amal00290  Valine, leucine and isoleucine biosynthesis
amal00300  Lysine biosynthesis
amal00310  Lysine degradation
amal00330  Arginine and proline metabolism
amal00332  Carbapenem biosynthesis
amal00340  Histidine metabolism
amal00350  Tyrosine metabolism
amal00360  Phenylalanine metabolism
amal00361  Chlorocyclohexane and chlorobenzene degradation
amal00362  Benzoate degradation
amal00380  Tryptophan metabolism
amal00400  Phenylalanine, tyrosine and tryptophan biosynthesis
amal00401  Novobiocin biosynthesis
amal00410  beta-Alanine metabolism
amal00430  Taurine and hypotaurine metabolism
amal00450  Selenocompound metabolism
amal00460  Cyanoamino acid metabolism
amal00470  D-Amino acid metabolism
amal00480  Glutathione metabolism
amal00500  Starch and sucrose metabolism
amal00511  Other glycan degradation
amal00520  Amino sugar and nucleotide sugar metabolism
amal00521  Streptomycin biosynthesis
amal00523  Polyketide sugar unit biosynthesis
amal00525  Acarbose and validamycin biosynthesis
amal00540  Lipopolysaccharide biosynthesis
amal00541  O-Antigen nucleotide sugar biosynthesis
amal00542  O-Antigen repeat unit biosynthesis
amal00543  Exopolysaccharide biosynthesis
amal00550  Peptidoglycan biosynthesis
amal00552  Teichoic acid biosynthesis
amal00561  Glycerolipid metabolism
amal00562  Inositol phosphate metabolism
amal00564  Glycerophospholipid metabolism
amal00565  Ether lipid metabolism
amal00590  Arachidonic acid metabolism
amal00592  alpha-Linolenic acid metabolism
amal00620  Pyruvate metabolism
amal00623  Toluene degradation
amal00625  Chloroalkane and chloroalkene degradation
amal00626  Naphthalene degradation
amal00627  Aminobenzoate degradation
amal00630  Glyoxylate and dicarboxylate metabolism
amal00633  Nitrotoluene degradation
amal00640  Propanoate metabolism
amal00643  Styrene degradation
amal00650  Butanoate metabolism
amal00660  C5-Branched dibasic acid metabolism
amal00670  One carbon pool by folate
amal00680  Methane metabolism
amal00710  Carbon fixation by Calvin cycle
amal00720  Other carbon fixation pathways
amal00730  Thiamine metabolism
amal00740  Riboflavin metabolism
amal00750  Vitamin B6 metabolism
amal00760  Nicotinate and nicotinamide metabolism
amal00770  Pantothenate and CoA biosynthesis
amal00780  Biotin metabolism
amal00785  Lipoic acid metabolism
amal00790  Folate biosynthesis
amal00860  Porphyrin metabolism
amal00900  Terpenoid backbone biosynthesis
amal00903  Limonene degradation
amal00907  Pinene, camphor and geraniol degradation
amal00910  Nitrogen metabolism
amal00920  Sulfur metabolism
amal00930  Caprolactam degradation
amal00946  Degradation of flavonoids
amal00999  Biosynthesis of various plant secondary metabolites
amal01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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