PATHWAY: amyc01100 Help Entry amyc01100                   Pathway                                 Name Metabolic pathways - Amycolatopsis sp. AA4 Class BRITE hierarchy Pathway map amyc01100   Metabolic pathways Module amyc_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:amyc01100] amyc_M00002   Glycolysis, core module involving three-carbon compounds [PATH:amyc01100] amyc_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:amyc01100] amyc_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:amyc01100] amyc_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:amyc01100] amyc_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:amyc01100] amyc_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:amyc01100] amyc_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:amyc01100] amyc_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:amyc01100] amyc_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:amyc01100] amyc_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:amyc01100] amyc_M00012   Glyoxylate cycle [PATH:amyc01100] amyc_M00015   Proline biosynthesis, glutamate => proline [PATH:amyc01100] amyc_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:amyc01100] amyc_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:amyc01100] amyc_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:amyc01100] amyc_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:amyc01100] amyc_M00026   Histidine biosynthesis, PRPP => histidine [PATH:amyc01100] amyc_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:amyc01100] amyc_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:amyc01100] amyc_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:amyc01100] amyc_M00035   Methionine degradation [PATH:amyc01100] amyc_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:amyc01100] amyc_M00038   Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH:amyc01100] amyc_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:amyc01100] amyc_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:amyc01100] amyc_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:amyc01100] amyc_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:amyc01100] amyc_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:amyc01100] amyc_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:amyc01100] amyc_M00082   Fatty acid biosynthesis, initiation [PATH:amyc01100] amyc_M00083   Fatty acid biosynthesis, elongation [PATH:amyc01100] amyc_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:amyc01100] amyc_M00087   beta-Oxidation [PATH:amyc01100] amyc_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:amyc01100] amyc_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:amyc01100] amyc_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:amyc01100] amyc_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:amyc01100] amyc_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:amyc01100] amyc_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:amyc01100] amyc_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:amyc01100] amyc_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:amyc01100] amyc_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:amyc01100] amyc_M00135   GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:amyc01100] amyc_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:amyc01100] amyc_M00149   Succinate dehydrogenase, prokaryotes [PATH:amyc01100] amyc_M00151   Cytochrome bc1 complex respiratory unit [PATH:amyc01100] amyc_M00155   Cytochrome c oxidase, prokaryotes [PATH:amyc01100] amyc_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:amyc01100] amyc_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:amyc01100] amyc_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:amyc01100] amyc_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:amyc01100] amyc_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:amyc01100] amyc_M00546   Purine degradation, xanthine => urea [PATH:amyc01100] amyc_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:amyc01100] amyc_M00555   Betaine biosynthesis, choline => betaine [PATH:amyc01100] amyc_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:amyc01100] amyc_M00621   Glycine cleavage system [PATH:amyc01100] amyc_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:amyc01100] amyc_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:amyc01100] amyc_M00793   dTDP-L-rhamnose biosynthesis [PATH:amyc01100] amyc_M00844   Arginine biosynthesis, ornithine => arginine [PATH:amyc01100] amyc_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:amyc01100] amyc_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:amyc01100] amyc_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:amyc01100] amyc_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:amyc01100] amyc_M00912   NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:amyc01100] amyc_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:amyc01100] amyc_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:amyc01100] amyc_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:amyc01100] amyc_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:amyc01100] amyc_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:amyc01100] amyc_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:amyc01100] amyc_M00970   Proline degradation, proline => glutamate [PATH:amyc01100] amyc_M00972   Proline metabolism [PATH:amyc01100] Organism Amycolatopsis sp. AA4 [GN:amyc] Related pathway amyc00010   Glycolysis / Gluconeogenesis amyc00020   Citrate cycle (TCA cycle) amyc00030   Pentose phosphate pathway amyc00040   Pentose and glucuronate interconversions amyc00051   Fructose and mannose metabolism amyc00052   Galactose metabolism amyc00053   Ascorbate and aldarate metabolism amyc00061   Fatty acid biosynthesis amyc00071   Fatty acid degradation amyc00130   Ubiquinone and other terpenoid-quinone biosynthesis amyc00190   Oxidative phosphorylation amyc00220   Arginine biosynthesis amyc00230   Purine metabolism amyc00240   Pyrimidine metabolism amyc00250   Alanine, aspartate and glutamate metabolism amyc00260   Glycine, serine and threonine metabolism amyc00261   Monobactam biosynthesis amyc00270   Cysteine and methionine metabolism amyc00280   Valine, leucine and isoleucine degradation amyc00290   Valine, leucine and isoleucine biosynthesis amyc00300   Lysine biosynthesis amyc00310   Lysine degradation amyc00311   Penicillin and cephalosporin biosynthesis amyc00330   Arginine and proline metabolism amyc00332   Carbapenem biosynthesis amyc00340   Histidine metabolism amyc00350   Tyrosine metabolism amyc00360   Phenylalanine metabolism amyc00361   Chlorocyclohexane and chlorobenzene degradation amyc00362   Benzoate degradation amyc00364   Fluorobenzoate degradation amyc00380   Tryptophan metabolism amyc00400   Phenylalanine, tyrosine and tryptophan biosynthesis amyc00401   Novobiocin biosynthesis amyc00405   Phenazine biosynthesis amyc00410   beta-Alanine metabolism amyc00430   Taurine and hypotaurine metabolism amyc00440   Phosphonate and phosphinate metabolism amyc00450   Selenocompound metabolism amyc00460   Cyanoamino acid metabolism amyc00470   D-Amino acid metabolism amyc00480   Glutathione metabolism amyc00500   Starch and sucrose metabolism amyc00511   Other glycan degradation amyc00514   Other types of O-glycan biosynthesis amyc00515   Mannose type O-glycan biosynthesis amyc00520   Amino sugar and nucleotide sugar metabolism amyc00521   Streptomycin biosynthesis amyc00523   Polyketide sugar unit biosynthesis amyc00525   Acarbose and validamycin biosynthesis amyc00540   Lipopolysaccharide biosynthesis amyc00541   O-Antigen nucleotide sugar biosynthesis amyc00542   O-Antigen repeat unit biosynthesis amyc00543   Exopolysaccharide biosynthesis amyc00550   Peptidoglycan biosynthesis amyc00552   Teichoic acid biosynthesis amyc00561   Glycerolipid metabolism amyc00562   Inositol phosphate metabolism amyc00564   Glycerophospholipid metabolism amyc00565   Ether lipid metabolism amyc00592   alpha-Linolenic acid metabolism amyc00600   Sphingolipid metabolism amyc00620   Pyruvate metabolism amyc00621   Dioxin degradation amyc00622   Xylene degradation amyc00623   Toluene degradation amyc00625   Chloroalkane and chloroalkene degradation amyc00626   Naphthalene degradation amyc00627   Aminobenzoate degradation amyc00630   Glyoxylate and dicarboxylate metabolism amyc00633   Nitrotoluene degradation amyc00640   Propanoate metabolism amyc00643   Styrene degradation amyc00650   Butanoate metabolism amyc00660   C5-Branched dibasic acid metabolism amyc00670   One carbon pool by folate amyc00680   Methane metabolism amyc00710   Carbon fixation by Calvin cycle amyc00720   Other carbon fixation pathways amyc00730   Thiamine metabolism amyc00740   Riboflavin metabolism amyc00750   Vitamin B6 metabolism amyc00760   Nicotinate and nicotinamide metabolism amyc00770   Pantothenate and CoA biosynthesis amyc00780   Biotin metabolism amyc00785   Lipoic acid metabolism amyc00790   Folate biosynthesis amyc00791   Atrazine degradation amyc00860   Porphyrin metabolism amyc00900   Terpenoid backbone biosynthesis amyc00903   Limonene degradation amyc00906   Carotenoid biosynthesis amyc00907   Pinene, camphor and geraniol degradation amyc00909   Sesquiterpenoid and triterpenoid biosynthesis amyc00910   Nitrogen metabolism amyc00920   Sulfur metabolism amyc00930   Caprolactam degradation amyc00946   Degradation of flavonoids amyc00984   Steroid degradation amyc00998   Biosynthesis of various antibiotics amyc00999   Biosynthesis of various plant secondary metabolites amyc01040   Biosynthesis of unsaturated fatty acids amyc01053   Biosynthesis of siderophore group nonribosomal peptides amyc01055   Biosynthesis of vancomycin group antibiotics amyc01057   Biosynthesis of type II polyketide products amyc01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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