KEGG   PATHWAY: amyy01100
Entry
amyy01100                   Pathway                                
Name
Metabolic pathways - Amycolatopsis sp. YIM 10
Class
Pathway map
amyy01100  Metabolic pathways
amyy01100

Module
amyy_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:amyy01100]
amyy_M00002  Glycolysis, core module involving three-carbon compounds [PATH:amyy01100]
amyy_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:amyy01100]
amyy_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:amyy01100]
amyy_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:amyy01100]
amyy_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:amyy01100]
amyy_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:amyy01100]
amyy_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:amyy01100]
amyy_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:amyy01100]
amyy_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:amyy01100]
amyy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:amyy01100]
amyy_M00012  Glyoxylate cycle [PATH:amyy01100]
amyy_M00015  Proline biosynthesis, glutamate => proline [PATH:amyy01100]
amyy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:amyy01100]
amyy_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:amyy01100]
amyy_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:amyy01100]
amyy_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:amyy01100]
amyy_M00021  Cysteine biosynthesis, serine => cysteine [PATH:amyy01100]
amyy_M00026  Histidine biosynthesis, PRPP => histidine [PATH:amyy01100]
amyy_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:amyy01100]
amyy_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:amyy01100]
amyy_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:amyy01100]
amyy_M00035  Methionine degradation [PATH:amyy01100]
amyy_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:amyy01100]
amyy_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:amyy01100]
amyy_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:amyy01100]
amyy_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:amyy01100]
amyy_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:amyy01100]
amyy_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:amyy01100]
amyy_M00082  Fatty acid biosynthesis, initiation [PATH:amyy01100]
amyy_M00083  Fatty acid biosynthesis, elongation [PATH:amyy01100]
amyy_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:amyy01100]
amyy_M00087  beta-Oxidation [PATH:amyy01100]
amyy_M00088  Ketone body biosynthesis, acetyl-CoA => acetoacetate/3-hydroxybutyrate/acetone [PATH:amyy01100]
amyy_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:amyy01100]
amyy_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:amyy01100]
amyy_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:amyy01100]
amyy_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:amyy01100]
amyy_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:amyy01100]
amyy_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:amyy01100]
amyy_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:amyy01100]
amyy_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:amyy01100]
amyy_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:amyy01100]
amyy_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:amyy01100]
amyy_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:amyy01100]
amyy_M00149  Succinate dehydrogenase, prokaryotes [PATH:amyy01100]
amyy_M00151  Cytochrome bc1 complex respiratory unit [PATH:amyy01100]
amyy_M00155  Cytochrome c oxidase, prokaryotes [PATH:amyy01100]
amyy_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:amyy01100]
amyy_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:amyy01100]
amyy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:amyy01100]
amyy_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:amyy01100]
amyy_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:amyy01100]
amyy_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:amyy01100]
amyy_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:amyy01100]
amyy_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:amyy01100]
amyy_M00555  Betaine biosynthesis, choline => betaine [PATH:amyy01100]
amyy_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:amyy01100]
amyy_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:amyy01100]
amyy_M00621  Glycine cleavage system [PATH:amyy01100]
amyy_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:amyy01100]
amyy_M00673  Cephamycin C biosynthesis, aminoadipate + cycteine + valine => cephamycin C [PATH:amyy01100]
amyy_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:amyy01100]
amyy_M00793  dTDP-L-rhamnose biosynthesis [PATH:amyy01100]
amyy_M00824  9-membered enediyne core biosynthesis, malonyl-CoA => 3-hydroxyhexadeca-4,6,8,10,12,14-hexaenoyl-ACP => 9-membered enediyne core [PATH:amyy01100]
amyy_M00844  Arginine biosynthesis, ornithine => arginine [PATH:amyy01100]
amyy_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:amyy01100]
amyy_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:amyy01100]
amyy_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:amyy01100]
amyy_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:amyy01100]
amyy_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:amyy01100]
amyy_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:amyy01100]
amyy_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:amyy01100]
amyy_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:amyy01100]
amyy_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:amyy01100]
amyy_M00970  Proline degradation, proline => glutamate [PATH:amyy01100]
amyy_M00972  Proline metabolism [PATH:amyy01100]
Organism
Amycolatopsis sp. YIM 10 [GN:amyy]
Related
pathway
amyy00010  Glycolysis / Gluconeogenesis
amyy00020  Citrate cycle (TCA cycle)
amyy00030  Pentose phosphate pathway
amyy00040  Pentose and glucuronate interconversions
amyy00051  Fructose and mannose metabolism
amyy00052  Galactose metabolism
amyy00053  Ascorbate and aldarate metabolism
amyy00061  Fatty acid biosynthesis
amyy00071  Fatty acid degradation
amyy00121  Secondary bile acid biosynthesis
amyy00130  Ubiquinone and other terpenoid-quinone biosynthesis
amyy00190  Oxidative phosphorylation
amyy00220  Arginine biosynthesis
amyy00230  Purine metabolism
amyy00240  Pyrimidine metabolism
amyy00250  Alanine, aspartate and glutamate metabolism
amyy00260  Glycine, serine and threonine metabolism
amyy00261  Monobactam biosynthesis
amyy00270  Cysteine and methionine metabolism
amyy00280  Valine, leucine and isoleucine degradation
amyy00290  Valine, leucine and isoleucine biosynthesis
amyy00300  Lysine biosynthesis
amyy00310  Lysine degradation
amyy00311  Penicillin and cephalosporin biosynthesis
amyy00330  Arginine and proline metabolism
amyy00332  Carbapenem biosynthesis
amyy00340  Histidine metabolism
amyy00350  Tyrosine metabolism
amyy00360  Phenylalanine metabolism
amyy00361  Chlorocyclohexane and chlorobenzene degradation
amyy00362  Benzoate degradation
amyy00364  Fluorobenzoate degradation
amyy00380  Tryptophan metabolism
amyy00400  Phenylalanine, tyrosine and tryptophan biosynthesis
amyy00401  Novobiocin biosynthesis
amyy00405  Phenazine biosynthesis
amyy00410  beta-Alanine metabolism
amyy00430  Taurine and hypotaurine metabolism
amyy00440  Phosphonate and phosphinate metabolism
amyy00450  Selenocompound metabolism
amyy00460  Cyanoamino acid metabolism
amyy00470  D-Amino acid metabolism
amyy00480  Glutathione metabolism
amyy00500  Starch and sucrose metabolism
amyy00511  Other glycan degradation
amyy00514  Other types of O-glycan biosynthesis
amyy00515  Mannose type O-glycan biosynthesis
amyy00520  Amino sugar and nucleotide sugar metabolism
amyy00521  Streptomycin biosynthesis
amyy00523  Polyketide sugar unit biosynthesis
amyy00525  Acarbose and validamycin biosynthesis
amyy00540  Lipopolysaccharide biosynthesis
amyy00541  O-Antigen nucleotide sugar biosynthesis
amyy00542  O-Antigen repeat unit biosynthesis
amyy00543  Exopolysaccharide biosynthesis
amyy00550  Peptidoglycan biosynthesis
amyy00552  Teichoic acid biosynthesis
amyy00561  Glycerolipid metabolism
amyy00562  Inositol phosphate metabolism
amyy00564  Glycerophospholipid metabolism
amyy00565  Ether lipid metabolism
amyy00592  alpha-Linolenic acid metabolism
amyy00600  Sphingolipid metabolism
amyy00620  Pyruvate metabolism
amyy00621  Dioxin degradation
amyy00622  Xylene degradation
amyy00623  Toluene degradation
amyy00625  Chloroalkane and chloroalkene degradation
amyy00626  Naphthalene degradation
amyy00627  Aminobenzoate degradation
amyy00630  Glyoxylate and dicarboxylate metabolism
amyy00633  Nitrotoluene degradation
amyy00640  Propanoate metabolism
amyy00643  Styrene degradation
amyy00650  Butanoate metabolism
amyy00660  C5-Branched dibasic acid metabolism
amyy00670  One carbon pool by folate
amyy00680  Methane metabolism
amyy00710  Carbon fixation by Calvin cycle
amyy00720  Other carbon fixation pathways
amyy00730  Thiamine metabolism
amyy00740  Riboflavin metabolism
amyy00750  Vitamin B6 metabolism
amyy00760  Nicotinate and nicotinamide metabolism
amyy00770  Pantothenate and CoA biosynthesis
amyy00780  Biotin metabolism
amyy00785  Lipoic acid metabolism
amyy00790  Folate biosynthesis
amyy00791  Atrazine degradation
amyy00860  Porphyrin metabolism
amyy00900  Terpenoid backbone biosynthesis
amyy00903  Limonene degradation
amyy00906  Carotenoid biosynthesis
amyy00907  Pinene, camphor and geraniol degradation
amyy00909  Sesquiterpenoid and triterpenoid biosynthesis
amyy00910  Nitrogen metabolism
amyy00920  Sulfur metabolism
amyy00930  Caprolactam degradation
amyy00946  Degradation of flavonoids
amyy00984  Steroid degradation
amyy00996  Biosynthesis of various alkaloids
amyy00997  Biosynthesis of various other secondary metabolites
amyy00998  Biosynthesis of various antibiotics
amyy00999  Biosynthesis of various plant secondary metabolites
amyy01040  Biosynthesis of unsaturated fatty acids
amyy01051  Biosynthesis of ansamycins
amyy01053  Biosynthesis of siderophore group nonribosomal peptides
amyy01055  Biosynthesis of vancomycin group antibiotics
amyy01056  Biosynthesis of type II polyketide backbone
amyy01057  Biosynthesis of type II polyketide products
amyy01059  Biosynthesis of enediyne antibiotics
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system