PATHWAY: apak01100 Help Entry apak01100                   Pathway                                 Name Metabolic pathways - Aeribacillus pallidus Class BRITE hierarchy Pathway map apak01100   Metabolic pathways Module apak_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:apak01100] apak_M00002   Glycolysis, core module involving three-carbon compounds [PATH:apak01100] apak_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:apak01100] apak_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:apak01100] apak_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:apak01100] apak_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:apak01100] apak_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:apak01100] apak_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:apak01100] apak_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:apak01100] apak_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:apak01100] apak_M00012   Glyoxylate cycle [PATH:apak01100] apak_M00015   Proline biosynthesis, glutamate => proline [PATH:apak01100] apak_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:apak01100] apak_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:apak01100] apak_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:apak01100] apak_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:apak01100] apak_M00021   Cysteine biosynthesis, serine => cysteine [PATH:apak01100] apak_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:apak01100] apak_M00026   Histidine biosynthesis, PRPP => histidine [PATH:apak01100] apak_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:apak01100] apak_M00034   Methionine salvage pathway [PATH:apak01100] apak_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:apak01100] apak_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:apak01100] apak_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:apak01100] apak_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:apak01100] apak_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:apak01100] apak_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:apak01100] apak_M00082   Fatty acid biosynthesis, initiation [PATH:apak01100] apak_M00083   Fatty acid biosynthesis, elongation [PATH:apak01100] apak_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:apak01100] apak_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:apak01100] apak_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:apak01100] apak_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:apak01100] apak_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:apak01100] apak_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:apak01100] apak_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:apak01100] apak_M00151   Cytochrome bc1 complex respiratory unit [PATH:apak01100] apak_M00155   Cytochrome c oxidase, prokaryotes [PATH:apak01100] apak_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:apak01100] apak_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:apak01100] apak_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:apak01100] apak_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:apak01100] apak_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:apak01100] apak_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:apak01100] apak_M00525   Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:apak01100] apak_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:apak01100] apak_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:apak01100] apak_M00569   Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA [PATH:apak01100] apak_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:apak01100] apak_M00577   Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:apak01100] apak_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:apak01100] apak_M00621   Glycine cleavage system [PATH:apak01100] apak_M00793   dTDP-L-rhamnose biosynthesis [PATH:apak01100] apak_M00844   Arginine biosynthesis, ornithine => arginine [PATH:apak01100] apak_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:apak01100] apak_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:apak01100] apak_M00883   Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:apak01100] apak_M00895   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/glycine) => TMP/TPP [PATH:apak01100] apak_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:apak01100] apak_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:apak01100] apak_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:apak01100] apak_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:apak01100] Organism Aeribacillus pallidus [GN:apak] Related pathway apak00010   Glycolysis / Gluconeogenesis apak00020   Citrate cycle (TCA cycle) apak00030   Pentose phosphate pathway apak00040   Pentose and glucuronate interconversions apak00051   Fructose and mannose metabolism apak00052   Galactose metabolism apak00061   Fatty acid biosynthesis apak00071   Fatty acid degradation apak00074   Mycolic acid biosynthesis apak00130   Ubiquinone and other terpenoid-quinone biosynthesis apak00190   Oxidative phosphorylation apak00220   Arginine biosynthesis apak00230   Purine metabolism apak00240   Pyrimidine metabolism apak00250   Alanine, aspartate and glutamate metabolism apak00260   Glycine, serine and threonine metabolism apak00261   Monobactam biosynthesis apak00270   Cysteine and methionine metabolism apak00280   Valine, leucine and isoleucine degradation apak00290   Valine, leucine and isoleucine biosynthesis apak00300   Lysine biosynthesis apak00310   Lysine degradation apak00330   Arginine and proline metabolism apak00332   Carbapenem biosynthesis apak00340   Histidine metabolism apak00350   Tyrosine metabolism apak00360   Phenylalanine metabolism apak00362   Benzoate degradation apak00365   Furfural degradation apak00380   Tryptophan metabolism apak00400   Phenylalanine, tyrosine and tryptophan biosynthesis apak00401   Novobiocin biosynthesis apak00410   beta-Alanine metabolism apak00430   Taurine and hypotaurine metabolism apak00450   Selenocompound metabolism apak00460   Cyanoamino acid metabolism apak00470   D-Amino acid metabolism apak00480   Glutathione metabolism apak00500   Starch and sucrose metabolism apak00520   Amino sugar and nucleotide sugar metabolism apak00521   Streptomycin biosynthesis apak00523   Polyketide sugar unit biosynthesis apak00525   Acarbose and validamycin biosynthesis apak00540   Lipopolysaccharide biosynthesis apak00541   O-Antigen nucleotide sugar biosynthesis apak00542   O-Antigen repeat unit biosynthesis apak00543   Exopolysaccharide biosynthesis apak00550   Peptidoglycan biosynthesis apak00552   Teichoic acid biosynthesis apak00561   Glycerolipid metabolism apak00562   Inositol phosphate metabolism apak00564   Glycerophospholipid metabolism apak00592   alpha-Linolenic acid metabolism apak00620   Pyruvate metabolism apak00621   Dioxin degradation apak00622   Xylene degradation apak00625   Chloroalkane and chloroalkene degradation apak00626   Naphthalene degradation apak00627   Aminobenzoate degradation apak00630   Glyoxylate and dicarboxylate metabolism apak00640   Propanoate metabolism apak00643   Styrene degradation apak00650   Butanoate metabolism apak00660   C5-Branched dibasic acid metabolism apak00670   One carbon pool by folate apak00680   Methane metabolism apak00710   Carbon fixation by Calvin cycle apak00720   Other carbon fixation pathways apak00730   Thiamine metabolism apak00740   Riboflavin metabolism apak00750   Vitamin B6 metabolism apak00760   Nicotinate and nicotinamide metabolism apak00770   Pantothenate and CoA biosynthesis apak00780   Biotin metabolism apak00785   Lipoic acid metabolism apak00790   Folate biosynthesis apak00791   Atrazine degradation apak00860   Porphyrin metabolism apak00900   Terpenoid backbone biosynthesis apak00907   Pinene, camphor and geraniol degradation apak00910   Nitrogen metabolism apak00920   Sulfur metabolism apak00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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