KEGG   PATHWAY: apb01100
Entry
apb01100                    Pathway                                
Name
Metabolic pathways - Candidatus Puniceispirillum marinum
Class
Pathway map
apb01100  Metabolic pathways
apb01100

Module
apb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:apb01100]
apb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:apb01100]
apb_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:apb01100]
apb_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:apb01100]
apb_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:apb01100]
apb_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:apb01100]
apb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:apb01100]
apb_M00012  Glyoxylate cycle [PATH:apb01100]
apb_M00015  Proline biosynthesis, glutamate => proline [PATH:apb01100]
apb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:apb01100]
apb_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:apb01100]
apb_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:apb01100]
apb_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:apb01100]
apb_M00021  Cysteine biosynthesis, serine => cysteine [PATH:apb01100]
apb_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:apb01100]
apb_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:apb01100]
apb_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:apb01100]
apb_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:apb01100]
apb_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:apb01100]
apb_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:apb01100]
apb_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:apb01100]
apb_M00082  Fatty acid biosynthesis, initiation [PATH:apb01100]
apb_M00083  Fatty acid biosynthesis, elongation [PATH:apb01100]
apb_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:apb01100]
apb_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:apb01100]
apb_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:apb01100]
apb_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:apb01100]
apb_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:apb01100]
apb_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:apb01100]
apb_M00140  C1-unit interconversion, prokaryotes [PATH:apb01100]
apb_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:apb01100]
apb_M00149  Succinate dehydrogenase, prokaryotes [PATH:apb01100]
apb_M00151  Cytochrome bc1 complex respiratory unit [PATH:apb01100]
apb_M00155  Cytochrome c oxidase, prokaryotes [PATH:apb01100]
apb_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:apb01100]
apb_M00168  CAM (Crassulacean acid metabolism), dark [PATH:apb01100]
apb_M00169  CAM (Crassulacean acid metabolism), light [PATH:apb01100]
apb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:apb01100]
apb_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:apb01100]
apb_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:apb01100]
apb_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:apb01100]
apb_M00555  Betaine biosynthesis, choline => betaine [PATH:apb01100]
apb_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:apb01100]
apb_M00621  Glycine cleavage system [PATH:apb01100]
apb_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:apb01100]
apb_M00844  Arginine biosynthesis, ornithine => arginine [PATH:apb01100]
apb_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:apb01100]
apb_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:apb01100]
apb_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:apb01100]
apb_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:apb01100]
apb_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:apb01100]
apb_M00970  Proline degradation, proline => glutamate [PATH:apb01100]
Organism
Candidatus Puniceispirillum marinum [GN:apb]
Related
pathway
apb00010  Glycolysis / Gluconeogenesis
apb00020  Citrate cycle (TCA cycle)
apb00030  Pentose phosphate pathway
apb00040  Pentose and glucuronate interconversions
apb00051  Fructose and mannose metabolism
apb00052  Galactose metabolism
apb00053  Ascorbate and aldarate metabolism
apb00061  Fatty acid biosynthesis
apb00071  Fatty acid degradation
apb00130  Ubiquinone and other terpenoid-quinone biosynthesis
apb00190  Oxidative phosphorylation
apb00220  Arginine biosynthesis
apb00230  Purine metabolism
apb00240  Pyrimidine metabolism
apb00250  Alanine, aspartate and glutamate metabolism
apb00260  Glycine, serine and threonine metabolism
apb00261  Monobactam biosynthesis
apb00270  Cysteine and methionine metabolism
apb00280  Valine, leucine and isoleucine degradation
apb00290  Valine, leucine and isoleucine biosynthesis
apb00300  Lysine biosynthesis
apb00310  Lysine degradation
apb00330  Arginine and proline metabolism
apb00332  Carbapenem biosynthesis
apb00340  Histidine metabolism
apb00350  Tyrosine metabolism
apb00360  Phenylalanine metabolism
apb00361  Chlorocyclohexane and chlorobenzene degradation
apb00362  Benzoate degradation
apb00380  Tryptophan metabolism
apb00400  Phenylalanine, tyrosine and tryptophan biosynthesis
apb00401  Novobiocin biosynthesis
apb00405  Phenazine biosynthesis
apb00410  beta-Alanine metabolism
apb00430  Taurine and hypotaurine metabolism
apb00450  Selenocompound metabolism
apb00460  Cyanoamino acid metabolism
apb00470  D-Amino acid metabolism
apb00480  Glutathione metabolism
apb00500  Starch and sucrose metabolism
apb00520  Amino sugar and nucleotide sugar metabolism
apb00521  Streptomycin biosynthesis
apb00540  Lipopolysaccharide biosynthesis
apb00541  O-Antigen nucleotide sugar biosynthesis
apb00543  Exopolysaccharide biosynthesis
apb00550  Peptidoglycan biosynthesis
apb00552  Teichoic acid biosynthesis
apb00561  Glycerolipid metabolism
apb00562  Inositol phosphate metabolism
apb00564  Glycerophospholipid metabolism
apb00600  Sphingolipid metabolism
apb00620  Pyruvate metabolism
apb00623  Toluene degradation
apb00625  Chloroalkane and chloroalkene degradation
apb00626  Naphthalene degradation
apb00627  Aminobenzoate degradation
apb00630  Glyoxylate and dicarboxylate metabolism
apb00633  Nitrotoluene degradation
apb00640  Propanoate metabolism
apb00643  Styrene degradation
apb00650  Butanoate metabolism
apb00660  C5-Branched dibasic acid metabolism
apb00670  One carbon pool by folate
apb00680  Methane metabolism
apb00710  Carbon fixation by Calvin cycle
apb00720  Other carbon fixation pathways
apb00730  Thiamine metabolism
apb00740  Riboflavin metabolism
apb00750  Vitamin B6 metabolism
apb00760  Nicotinate and nicotinamide metabolism
apb00770  Pantothenate and CoA biosynthesis
apb00780  Biotin metabolism
apb00785  Lipoic acid metabolism
apb00790  Folate biosynthesis
apb00860  Porphyrin metabolism
apb00900  Terpenoid backbone biosynthesis
apb00906  Carotenoid biosynthesis
apb00907  Pinene, camphor and geraniol degradation
apb00910  Nitrogen metabolism
apb00920  Sulfur metabolism
apb00930  Caprolactam degradation
KO pathway
ko01100   
LinkDB

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