PATHWAY: bacy01100 Help Entry bacy01100                   Pathway                                 Name Metabolic pathways - Bacillus sp. YP1 Class BRITE hierarchy Pathway map bacy01100   Metabolic pathways Module bacy_M00002   Glycolysis, core module involving three-carbon compounds [PATH:bacy01100] bacy_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bacy01100] bacy_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bacy01100] bacy_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:bacy01100] bacy_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bacy01100] bacy_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bacy01100] bacy_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:bacy01100] bacy_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bacy01100] bacy_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bacy01100] bacy_M00015   Proline biosynthesis, glutamate => proline [PATH:bacy01100] bacy_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:bacy01100] bacy_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bacy01100] bacy_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bacy01100] bacy_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:bacy01100] bacy_M00021   Cysteine biosynthesis, serine => cysteine [PATH:bacy01100] bacy_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bacy01100] bacy_M00026   Histidine biosynthesis, PRPP => histidine [PATH:bacy01100] bacy_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:bacy01100] bacy_M00034   Methionine salvage pathway [PATH:bacy01100] bacy_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:bacy01100] bacy_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bacy01100] bacy_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bacy01100] bacy_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bacy01100] bacy_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bacy01100] bacy_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bacy01100] bacy_M00082   Fatty acid biosynthesis, initiation [PATH:bacy01100] bacy_M00083   Fatty acid biosynthesis, elongation [PATH:bacy01100] bacy_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:bacy01100] bacy_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bacy01100] bacy_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:bacy01100] bacy_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bacy01100] bacy_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bacy01100] bacy_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bacy01100] bacy_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:bacy01100] bacy_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bacy01100] bacy_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bacy01100] bacy_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:bacy01100] bacy_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:bacy01100] bacy_M00135   GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:bacy01100] bacy_M00151   Cytochrome bc1 complex respiratory unit [PATH:bacy01100] bacy_M00155   Cytochrome c oxidase, prokaryotes [PATH:bacy01100] bacy_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:bacy01100] bacy_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:bacy01100] bacy_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bacy01100] bacy_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:bacy01100] bacy_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:bacy01100] bacy_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:bacy01100] bacy_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bacy01100] bacy_M00525   Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:bacy01100] bacy_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:bacy01100] bacy_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:bacy01100] bacy_M00555   Betaine biosynthesis, choline => betaine [PATH:bacy01100] bacy_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bacy01100] bacy_M00573   Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin [PATH:bacy01100] bacy_M00577   Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:bacy01100] bacy_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:bacy01100] bacy_M00609   Cysteine biosynthesis, methionine => cysteine [PATH:bacy01100] bacy_M00621   Glycine cleavage system [PATH:bacy01100] bacy_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:bacy01100] bacy_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:bacy01100] bacy_M00787   Bacilysin biosynthesis, prephenate => bacilysin [PATH:bacy01100] bacy_M00793   dTDP-L-rhamnose biosynthesis [PATH:bacy01100] bacy_M00844   Arginine biosynthesis, ornithine => arginine [PATH:bacy01100] bacy_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bacy01100] bacy_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bacy01100] bacy_M00877   Kanosamine biosynthesis, glucose 6-phosphate => kanosamine [PATH:bacy01100] bacy_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bacy01100] bacy_M00883   Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bacy01100] bacy_M00895   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/glycine) => TMP/TPP [PATH:bacy01100] bacy_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:bacy01100] bacy_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bacy01100] bacy_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bacy01100] bacy_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:bacy01100] bacy_M00970   Proline degradation, proline => glutamate [PATH:bacy01100] bacy_M00972   Proline metabolism [PATH:bacy01100] Organism Bacillus sp. YP1 [GN:bacy] Related pathway bacy00010   Glycolysis / Gluconeogenesis bacy00020   Citrate cycle (TCA cycle) bacy00030   Pentose phosphate pathway bacy00040   Pentose and glucuronate interconversions bacy00051   Fructose and mannose metabolism bacy00052   Galactose metabolism bacy00053   Ascorbate and aldarate metabolism bacy00061   Fatty acid biosynthesis bacy00071   Fatty acid degradation bacy00130   Ubiquinone and other terpenoid-quinone biosynthesis bacy00190   Oxidative phosphorylation bacy00220   Arginine biosynthesis bacy00230   Purine metabolism bacy00240   Pyrimidine metabolism bacy00250   Alanine, aspartate and glutamate metabolism bacy00260   Glycine, serine and threonine metabolism bacy00261   Monobactam biosynthesis bacy00270   Cysteine and methionine metabolism bacy00280   Valine, leucine and isoleucine degradation bacy00290   Valine, leucine and isoleucine biosynthesis bacy00300   Lysine biosynthesis bacy00310   Lysine degradation bacy00311   Penicillin and cephalosporin biosynthesis bacy00330   Arginine and proline metabolism bacy00332   Carbapenem biosynthesis bacy00340   Histidine metabolism bacy00350   Tyrosine metabolism bacy00360   Phenylalanine metabolism bacy00361   Chlorocyclohexane and chlorobenzene degradation bacy00362   Benzoate degradation bacy00380   Tryptophan metabolism bacy00400   Phenylalanine, tyrosine and tryptophan biosynthesis bacy00401   Novobiocin biosynthesis bacy00410   beta-Alanine metabolism bacy00430   Taurine and hypotaurine metabolism bacy00450   Selenocompound metabolism bacy00460   Cyanoamino acid metabolism bacy00470   D-Amino acid metabolism bacy00480   Glutathione metabolism bacy00500   Starch and sucrose metabolism bacy00511   Other glycan degradation bacy00520   Amino sugar and nucleotide sugar metabolism bacy00521   Streptomycin biosynthesis bacy00523   Polyketide sugar unit biosynthesis bacy00525   Acarbose and validamycin biosynthesis bacy00541   O-Antigen nucleotide sugar biosynthesis bacy00542   O-Antigen repeat unit biosynthesis bacy00543   Exopolysaccharide biosynthesis bacy00550   Peptidoglycan biosynthesis bacy00552   Teichoic acid biosynthesis bacy00561   Glycerolipid metabolism bacy00562   Inositol phosphate metabolism bacy00564   Glycerophospholipid metabolism bacy00592   alpha-Linolenic acid metabolism bacy00600   Sphingolipid metabolism bacy00620   Pyruvate metabolism bacy00622   Xylene degradation bacy00625   Chloroalkane and chloroalkene degradation bacy00626   Naphthalene degradation bacy00627   Aminobenzoate degradation bacy00630   Glyoxylate and dicarboxylate metabolism bacy00640   Propanoate metabolism bacy00650   Butanoate metabolism bacy00660   C5-Branched dibasic acid metabolism bacy00670   One carbon pool by folate bacy00680   Methane metabolism bacy00710   Carbon fixation by Calvin cycle bacy00720   Other carbon fixation pathways bacy00730   Thiamine metabolism bacy00740   Riboflavin metabolism bacy00750   Vitamin B6 metabolism bacy00760   Nicotinate and nicotinamide metabolism bacy00770   Pantothenate and CoA biosynthesis bacy00780   Biotin metabolism bacy00785   Lipoic acid metabolism bacy00790   Folate biosynthesis bacy00860   Porphyrin metabolism bacy00900   Terpenoid backbone biosynthesis bacy00906   Carotenoid biosynthesis bacy00907   Pinene, camphor and geraniol degradation bacy00910   Nitrogen metabolism bacy00920   Sulfur metabolism bacy00998   Biosynthesis of various antibiotics bacy00999   Biosynthesis of various plant secondary metabolites bacy01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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