KEGG   PATHWAY: bamf01100
Entry
bamf01100                   Pathway                                
Name
Metabolic pathways - Bacillus amyloliquefaciens LFB112
Class
Pathway map
bamf01100  Metabolic pathways
bamf01100

Module
bamf_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bamf01100]
bamf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bamf01100]
bamf_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bamf01100]
bamf_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bamf01100]
bamf_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:bamf01100]
bamf_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bamf01100]
bamf_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bamf01100]
bamf_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:bamf01100]
bamf_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bamf01100]
bamf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bamf01100]
bamf_M00015  Proline biosynthesis, glutamate => proline [PATH:bamf01100]
bamf_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:bamf01100]
bamf_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bamf01100]
bamf_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bamf01100]
bamf_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:bamf01100]
bamf_M00021  Cysteine biosynthesis, serine => cysteine [PATH:bamf01100]
bamf_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bamf01100]
bamf_M00026  Histidine biosynthesis, PRPP => histidine [PATH:bamf01100]
bamf_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:bamf01100]
bamf_M00034  Methionine salvage pathway [PATH:bamf01100]
bamf_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:bamf01100]
bamf_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bamf01100]
bamf_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bamf01100]
bamf_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bamf01100]
bamf_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bamf01100]
bamf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bamf01100]
bamf_M00082  Fatty acid biosynthesis, initiation [PATH:bamf01100]
bamf_M00083  Fatty acid biosynthesis, elongation [PATH:bamf01100]
bamf_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:bamf01100]
bamf_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bamf01100]
bamf_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:bamf01100]
bamf_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bamf01100]
bamf_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bamf01100]
bamf_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bamf01100]
bamf_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:bamf01100]
bamf_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bamf01100]
bamf_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bamf01100]
bamf_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:bamf01100]
bamf_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:bamf01100]
bamf_M00151  Cytochrome bc1 complex respiratory unit [PATH:bamf01100]
bamf_M00155  Cytochrome c oxidase, prokaryotes [PATH:bamf01100]
bamf_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:bamf01100]
bamf_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:bamf01100]
bamf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bamf01100]
bamf_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:bamf01100]
bamf_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:bamf01100]
bamf_M00416  Cytochrome aa3-600 menaquinol oxidase [PATH:bamf01100]
bamf_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bamf01100]
bamf_M00525  Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:bamf01100]
bamf_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bamf01100]
bamf_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:bamf01100]
bamf_M00555  Betaine biosynthesis, choline => betaine [PATH:bamf01100]
bamf_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bamf01100]
bamf_M00573  Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin [PATH:bamf01100]
bamf_M00577  Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:bamf01100]
bamf_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:bamf01100]
bamf_M00609  Cysteine biosynthesis, methionine => cysteine [PATH:bamf01100]
bamf_M00621  Glycine cleavage system [PATH:bamf01100]
bamf_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:bamf01100]
bamf_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:bamf01100]
bamf_M00787  Bacilysin biosynthesis, prephenate => bacilysin [PATH:bamf01100]
bamf_M00793  dTDP-L-rhamnose biosynthesis [PATH:bamf01100]
bamf_M00844  Arginine biosynthesis, ornithine => arginine [PATH:bamf01100]
bamf_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bamf01100]
bamf_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bamf01100]
bamf_M00883  Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bamf01100]
bamf_M00895  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/glycine) => TMP/TPP [PATH:bamf01100]
bamf_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:bamf01100]
bamf_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bamf01100]
bamf_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bamf01100]
bamf_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bamf01100]
bamf_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:bamf01100]
bamf_M00970  Proline degradation, proline => glutamate [PATH:bamf01100]
bamf_M00972  Proline metabolism [PATH:bamf01100]
Organism
Bacillus amyloliquefaciens LFB112 [GN:bamf]
Related
pathway
bamf00010  Glycolysis / Gluconeogenesis
bamf00020  Citrate cycle (TCA cycle)
bamf00030  Pentose phosphate pathway
bamf00040  Pentose and glucuronate interconversions
bamf00051  Fructose and mannose metabolism
bamf00052  Galactose metabolism
bamf00053  Ascorbate and aldarate metabolism
bamf00061  Fatty acid biosynthesis
bamf00071  Fatty acid degradation
bamf00074  Mycolic acid biosynthesis
bamf00130  Ubiquinone and other terpenoid-quinone biosynthesis
bamf00190  Oxidative phosphorylation
bamf00220  Arginine biosynthesis
bamf00230  Purine metabolism
bamf00240  Pyrimidine metabolism
bamf00250  Alanine, aspartate and glutamate metabolism
bamf00260  Glycine, serine and threonine metabolism
bamf00261  Monobactam biosynthesis
bamf00270  Cysteine and methionine metabolism
bamf00280  Valine, leucine and isoleucine degradation
bamf00290  Valine, leucine and isoleucine biosynthesis
bamf00300  Lysine biosynthesis
bamf00310  Lysine degradation
bamf00311  Penicillin and cephalosporin biosynthesis
bamf00330  Arginine and proline metabolism
bamf00332  Carbapenem biosynthesis
bamf00340  Histidine metabolism
bamf00350  Tyrosine metabolism
bamf00360  Phenylalanine metabolism
bamf00361  Chlorocyclohexane and chlorobenzene degradation
bamf00362  Benzoate degradation
bamf00380  Tryptophan metabolism
bamf00400  Phenylalanine, tyrosine and tryptophan biosynthesis
bamf00401  Novobiocin biosynthesis
bamf00410  beta-Alanine metabolism
bamf00430  Taurine and hypotaurine metabolism
bamf00450  Selenocompound metabolism
bamf00460  Cyanoamino acid metabolism
bamf00470  D-Amino acid metabolism
bamf00480  Glutathione metabolism
bamf00500  Starch and sucrose metabolism
bamf00511  Other glycan degradation
bamf00520  Amino sugar and nucleotide sugar metabolism
bamf00521  Streptomycin biosynthesis
bamf00523  Polyketide sugar unit biosynthesis
bamf00525  Acarbose and validamycin biosynthesis
bamf00541  O-Antigen nucleotide sugar biosynthesis
bamf00542  O-Antigen repeat unit biosynthesis
bamf00543  Exopolysaccharide biosynthesis
bamf00550  Peptidoglycan biosynthesis
bamf00552  Teichoic acid biosynthesis
bamf00561  Glycerolipid metabolism
bamf00562  Inositol phosphate metabolism
bamf00564  Glycerophospholipid metabolism
bamf00592  alpha-Linolenic acid metabolism
bamf00600  Sphingolipid metabolism
bamf00620  Pyruvate metabolism
bamf00622  Xylene degradation
bamf00625  Chloroalkane and chloroalkene degradation
bamf00626  Naphthalene degradation
bamf00627  Aminobenzoate degradation
bamf00630  Glyoxylate and dicarboxylate metabolism
bamf00640  Propanoate metabolism
bamf00650  Butanoate metabolism
bamf00660  C5-Branched dibasic acid metabolism
bamf00670  One carbon pool by folate
bamf00680  Methane metabolism
bamf00710  Carbon fixation by Calvin cycle
bamf00720  Other carbon fixation pathways
bamf00730  Thiamine metabolism
bamf00740  Riboflavin metabolism
bamf00750  Vitamin B6 metabolism
bamf00760  Nicotinate and nicotinamide metabolism
bamf00770  Pantothenate and CoA biosynthesis
bamf00780  Biotin metabolism
bamf00785  Lipoic acid metabolism
bamf00790  Folate biosynthesis
bamf00860  Porphyrin metabolism
bamf00900  Terpenoid backbone biosynthesis
bamf00906  Carotenoid biosynthesis
bamf00907  Pinene, camphor and geraniol degradation
bamf00910  Nitrogen metabolism
bamf00920  Sulfur metabolism
bamf00998  Biosynthesis of various antibiotics
bamf00999  Biosynthesis of various plant secondary metabolites
bamf01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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