KEGG   PATHWAY: bdi01100
Entry
bdi01100                    Pathway                                
Name
Metabolic pathways - Brachypodium distachyon (stiff brome)
Class
Pathway map
bdi01100  Metabolic pathways
bdi01100

Module
bdi_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bdi01100]
bdi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bdi01100]
bdi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bdi01100]
bdi_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bdi01100]
bdi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:bdi01100]
bdi_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bdi01100]
bdi_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bdi01100]
bdi_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:bdi01100]
bdi_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bdi01100]
bdi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bdi01100]
bdi_M00012  Glyoxylate cycle [PATH:bdi01100]
bdi_M00015  Proline biosynthesis, glutamate => proline [PATH:bdi01100]
bdi_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bdi01100]
bdi_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bdi01100]
bdi_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:bdi01100]
bdi_M00021  Cysteine biosynthesis, serine => cysteine [PATH:bdi01100]
bdi_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bdi01100]
bdi_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:bdi01100]
bdi_M00026  Histidine biosynthesis, PRPP => histidine [PATH:bdi01100]
bdi_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:bdi01100]
bdi_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:bdi01100]
bdi_M00034  Methionine salvage pathway [PATH:bdi01100]
bdi_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:bdi01100]
bdi_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:bdi01100]
bdi_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:bdi01100]
bdi_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:bdi01100]
bdi_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bdi01100]
bdi_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bdi01100]
bdi_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bdi01100]
bdi_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bdi01100]
bdi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bdi01100]
bdi_M00055  N-glycan precursor biosynthesis [PATH:bdi01100]
bdi_M00073  N-glycan precursor trimming [PATH:bdi01100]
bdi_M00081  Pectin degradation [PATH:bdi01100]
bdi_M00082  Fatty acid biosynthesis, initiation [PATH:bdi01100]
bdi_M00083  Fatty acid biosynthesis, elongation [PATH:bdi01100]
bdi_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:bdi01100]
bdi_M00087  beta-Oxidation [PATH:bdi01100]
bdi_M00089  Triacylglycerol biosynthesis [PATH:bdi01100]
bdi_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:bdi01100]
bdi_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:bdi01100]
bdi_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:bdi01100]
bdi_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:bdi01100]
bdi_M00098  Acylglycerol degradation [PATH:bdi01100]
bdi_M00100  Sphingosine degradation [PATH:bdi01100]
bdi_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:bdi01100]
bdi_M00113  Jasmonic acid biosynthesis [PATH:bdi01100]
bdi_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:bdi01100]
bdi_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bdi01100]
bdi_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:bdi01100]
bdi_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:bdi01100]
bdi_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:bdi01100]
bdi_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bdi01100]
bdi_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bdi01100]
bdi_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:bdi01100]
bdi_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:bdi01100]
bdi_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:bdi01100]
bdi_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:bdi01100]
bdi_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:bdi01100]
bdi_M00148  Succinate dehydrogenase (ubiquinone) [PATH:bdi01100]
bdi_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:bdi01100]
bdi_M00161  Photosystem II [PATH:bdi01100]
bdi_M00163  Photosystem I [PATH:bdi01100]
bdi_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:bdi01100]
bdi_M00168  CAM (Crassulacean acid metabolism), dark [PATH:bdi01100]
bdi_M00169  CAM (Crassulacean acid metabolism), light [PATH:bdi01100]
bdi_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:bdi01100]
bdi_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:bdi01100]
bdi_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:bdi01100]
bdi_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:bdi01100]
bdi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bdi01100]
bdi_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:bdi01100]
bdi_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:bdi01100]
bdi_M00369  Cyanogenic glycoside biosynthesis, tyrosine => dhurrin [PATH:bdi01100]
bdi_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:bdi01100]
bdi_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:bdi01100]
bdi_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bdi01100]
bdi_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:bdi01100]
bdi_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:bdi01100]
bdi_M00532  Photorespiration [PATH:bdi01100]
bdi_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bdi01100]
bdi_M00555  Betaine biosynthesis, choline => betaine [PATH:bdi01100]
bdi_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bdi01100]
bdi_M00621  Glycine cleavage system [PATH:bdi01100]
bdi_M00844  Arginine biosynthesis, ornithine => arginine [PATH:bdi01100]
bdi_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bdi01100]
bdi_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bdi01100]
bdi_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:bdi01100]
bdi_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:bdi01100]
bdi_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:bdi01100]
bdi_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:bdi01100]
bdi_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:bdi01100]
bdi_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:bdi01100]
bdi_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bdi01100]
bdi_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:bdi01100]
bdi_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:bdi01100]
bdi_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:bdi01100]
bdi_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:bdi01100]
bdi_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:bdi01100]
bdi_M00936  Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:bdi01100]
bdi_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:bdi01100]
bdi_M00953  Mugineic acid biosynthesis, methionine => 3-epihydroxymugineic acid [PATH:bdi01100]
bdi_M00970  Proline degradation, proline => glutamate [PATH:bdi01100]
bdi_M00972  Proline metabolism [PATH:bdi01100]
Organism
Brachypodium distachyon (stiff brome) [GN:bdi]
Related
pathway
bdi00010  Glycolysis / Gluconeogenesis
bdi00020  Citrate cycle (TCA cycle)
bdi00030  Pentose phosphate pathway
bdi00040  Pentose and glucuronate interconversions
bdi00051  Fructose and mannose metabolism
bdi00052  Galactose metabolism
bdi00053  Ascorbate and aldarate metabolism
bdi00061  Fatty acid biosynthesis
bdi00062  Fatty acid elongation
bdi00071  Fatty acid degradation
bdi00073  Cutin, suberine and wax biosynthesis
bdi00100  Steroid biosynthesis
bdi00130  Ubiquinone and other terpenoid-quinone biosynthesis
bdi00190  Oxidative phosphorylation
bdi00195  Photosynthesis
bdi00196  Photosynthesis - antenna proteins
bdi00220  Arginine biosynthesis
bdi00230  Purine metabolism
bdi00232  Caffeine metabolism
bdi00240  Pyrimidine metabolism
bdi00250  Alanine, aspartate and glutamate metabolism
bdi00260  Glycine, serine and threonine metabolism
bdi00261  Monobactam biosynthesis
bdi00270  Cysteine and methionine metabolism
bdi00280  Valine, leucine and isoleucine degradation
bdi00290  Valine, leucine and isoleucine biosynthesis
bdi00300  Lysine biosynthesis
bdi00310  Lysine degradation
bdi00330  Arginine and proline metabolism
bdi00340  Histidine metabolism
bdi00350  Tyrosine metabolism
bdi00360  Phenylalanine metabolism
bdi00380  Tryptophan metabolism
bdi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
bdi00402  Benzoxazinoid biosynthesis
bdi00410  beta-Alanine metabolism
bdi00430  Taurine and hypotaurine metabolism
bdi00440  Phosphonate and phosphinate metabolism
bdi00450  Selenocompound metabolism
bdi00460  Cyanoamino acid metabolism
bdi00470  D-Amino acid metabolism
bdi00480  Glutathione metabolism
bdi00500  Starch and sucrose metabolism
bdi00510  N-Glycan biosynthesis
bdi00511  Other glycan degradation
bdi00513  Various types of N-glycan biosynthesis
bdi00514  Other types of O-glycan biosynthesis
bdi00520  Amino sugar and nucleotide sugar metabolism
bdi00531  Glycosaminoglycan degradation
bdi00543  Exopolysaccharide biosynthesis
bdi00561  Glycerolipid metabolism
bdi00562  Inositol phosphate metabolism
bdi00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
bdi00564  Glycerophospholipid metabolism
bdi00565  Ether lipid metabolism
bdi00590  Arachidonic acid metabolism
bdi00591  Linoleic acid metabolism
bdi00592  alpha-Linolenic acid metabolism
bdi00600  Sphingolipid metabolism
bdi00601  Glycosphingolipid biosynthesis - lacto and neolacto series
bdi00603  Glycosphingolipid biosynthesis - globo and isoglobo series
bdi00604  Glycosphingolipid biosynthesis - ganglio series
bdi00620  Pyruvate metabolism
bdi00630  Glyoxylate and dicarboxylate metabolism
bdi00640  Propanoate metabolism
bdi00650  Butanoate metabolism
bdi00660  C5-Branched dibasic acid metabolism
bdi00670  One carbon pool by folate
bdi00710  Carbon fixation by Calvin cycle
bdi00730  Thiamine metabolism
bdi00740  Riboflavin metabolism
bdi00750  Vitamin B6 metabolism
bdi00760  Nicotinate and nicotinamide metabolism
bdi00770  Pantothenate and CoA biosynthesis
bdi00780  Biotin metabolism
bdi00785  Lipoic acid metabolism
bdi00790  Folate biosynthesis
bdi00860  Porphyrin metabolism
bdi00900  Terpenoid backbone biosynthesis
bdi00902  Monoterpenoid biosynthesis
bdi00904  Diterpenoid biosynthesis
bdi00905  Brassinosteroid biosynthesis
bdi00906  Carotenoid biosynthesis
bdi00908  Zeatin biosynthesis
bdi00909  Sesquiterpenoid and triterpenoid biosynthesis
bdi00910  Nitrogen metabolism
bdi00920  Sulfur metabolism
bdi00940  Phenylpropanoid biosynthesis
bdi00941  Flavonoid biosynthesis
bdi00942  Anthocyanin biosynthesis
bdi00944  Flavone and flavonol biosynthesis
bdi00950  Isoquinoline alkaloid biosynthesis
bdi00960  Tropane, piperidine and pyridine alkaloid biosynthesis
bdi00965  Betalain biosynthesis
bdi00966  Glucosinolate biosynthesis
bdi00999  Biosynthesis of various plant secondary metabolites
bdi01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system