PATHWAY: bgj01100 Help Entry bgj01100                    Pathway                                 Name Metabolic pathways - Brenneria goodwinii Class BRITE hierarchy Pathway map bgj01100   Metabolic pathways Module bgj_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bgj01100] bgj_M00002   Glycolysis, core module involving three-carbon compounds [PATH:bgj01100] bgj_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bgj01100] bgj_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bgj01100] bgj_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:bgj01100] bgj_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bgj01100] bgj_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bgj01100] bgj_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:bgj01100] bgj_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:bgj01100] bgj_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bgj01100] bgj_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bgj01100] bgj_M00015   Proline biosynthesis, glutamate => proline [PATH:bgj01100] bgj_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:bgj01100] bgj_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:bgj01100] bgj_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bgj01100] bgj_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bgj01100] bgj_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:bgj01100] bgj_M00021   Cysteine biosynthesis, serine => cysteine [PATH:bgj01100] bgj_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bgj01100] bgj_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:bgj01100] bgj_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:bgj01100] bgj_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:bgj01100] bgj_M00026   Histidine biosynthesis, PRPP => histidine [PATH:bgj01100] bgj_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:bgj01100] bgj_M00034   Methionine salvage pathway [PATH:bgj01100] bgj_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:bgj01100] bgj_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:bgj01100] bgj_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bgj01100] bgj_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bgj01100] bgj_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bgj01100] bgj_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:bgj01100] bgj_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bgj01100] bgj_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bgj01100] bgj_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:bgj01100] bgj_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:bgj01100] bgj_M00063   CMP-KDO biosynthesis [PATH:bgj01100] bgj_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:bgj01100] bgj_M00082   Fatty acid biosynthesis, initiation [PATH:bgj01100] bgj_M00083   Fatty acid biosynthesis, elongation [PATH:bgj01100] bgj_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:bgj01100] bgj_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bgj01100] bgj_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:bgj01100] bgj_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bgj01100] bgj_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:bgj01100] bgj_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bgj01100] bgj_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:bgj01100] bgj_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:bgj01100] bgj_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:bgj01100] bgj_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bgj01100] bgj_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:bgj01100] bgj_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bgj01100] bgj_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:bgj01100] bgj_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:bgj01100] bgj_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:bgj01100] bgj_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:bgj01100] bgj_M00149   Succinate dehydrogenase, prokaryotes [PATH:bgj01100] bgj_M00150   Fumarate reductase, prokaryotes [PATH:bgj01100] bgj_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:bgj01100] bgj_M00168   CAM (Crassulacean acid metabolism), dark [PATH:bgj01100] bgj_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:bgj01100] bgj_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:bgj01100] bgj_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bgj01100] bgj_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:bgj01100] bgj_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:bgj01100] bgj_M00417   Cytochrome o ubiquinol oxidase [PATH:bgj01100] bgj_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bgj01100] bgj_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bgj01100] bgj_M00550   Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:bgj01100] bgj_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:bgj01100] bgj_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:bgj01100] bgj_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bgj01100] bgj_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:bgj01100] bgj_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:bgj01100] bgj_M00621   Glycine cleavage system [PATH:bgj01100] bgj_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:bgj01100] bgj_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:bgj01100] bgj_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:bgj01100] bgj_M00793   dTDP-L-rhamnose biosynthesis [PATH:bgj01100] bgj_M00844   Arginine biosynthesis, ornithine => arginine [PATH:bgj01100] bgj_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bgj01100] bgj_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bgj01100] bgj_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:bgj01100] bgj_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bgj01100] bgj_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:bgj01100] bgj_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:bgj01100] bgj_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bgj01100] bgj_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:bgj01100] bgj_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:bgj01100] bgj_M00970   Proline degradation, proline => glutamate [PATH:bgj01100] Organism Brenneria goodwinii [GN:bgj] Related pathway bgj00010   Glycolysis / Gluconeogenesis bgj00020   Citrate cycle (TCA cycle) bgj00030   Pentose phosphate pathway bgj00040   Pentose and glucuronate interconversions bgj00051   Fructose and mannose metabolism bgj00052   Galactose metabolism bgj00053   Ascorbate and aldarate metabolism bgj00061   Fatty acid biosynthesis bgj00071   Fatty acid degradation bgj00130   Ubiquinone and other terpenoid-quinone biosynthesis bgj00190   Oxidative phosphorylation bgj00220   Arginine biosynthesis bgj00230   Purine metabolism bgj00240   Pyrimidine metabolism bgj00250   Alanine, aspartate and glutamate metabolism bgj00260   Glycine, serine and threonine metabolism bgj00261   Monobactam biosynthesis bgj00270   Cysteine and methionine metabolism bgj00280   Valine, leucine and isoleucine degradation bgj00290   Valine, leucine and isoleucine biosynthesis bgj00300   Lysine biosynthesis bgj00310   Lysine degradation bgj00330   Arginine and proline metabolism bgj00332   Carbapenem biosynthesis bgj00340   Histidine metabolism bgj00350   Tyrosine metabolism bgj00360   Phenylalanine metabolism bgj00361   Chlorocyclohexane and chlorobenzene degradation bgj00362   Benzoate degradation bgj00364   Fluorobenzoate degradation bgj00380   Tryptophan metabolism bgj00400   Phenylalanine, tyrosine and tryptophan biosynthesis bgj00401   Novobiocin biosynthesis bgj00410   beta-Alanine metabolism bgj00430   Taurine and hypotaurine metabolism bgj00450   Selenocompound metabolism bgj00460   Cyanoamino acid metabolism bgj00470   D-Amino acid metabolism bgj00480   Glutathione metabolism bgj00500   Starch and sucrose metabolism bgj00511   Other glycan degradation bgj00520   Amino sugar and nucleotide sugar metabolism bgj00521   Streptomycin biosynthesis bgj00523   Polyketide sugar unit biosynthesis bgj00525   Acarbose and validamycin biosynthesis bgj00540   Lipopolysaccharide biosynthesis bgj00541   O-Antigen nucleotide sugar biosynthesis bgj00542   O-Antigen repeat unit biosynthesis bgj00543   Exopolysaccharide biosynthesis bgj00550   Peptidoglycan biosynthesis bgj00552   Teichoic acid biosynthesis bgj00561   Glycerolipid metabolism bgj00562   Inositol phosphate metabolism bgj00564   Glycerophospholipid metabolism bgj00565   Ether lipid metabolism bgj00592   alpha-Linolenic acid metabolism bgj00600   Sphingolipid metabolism bgj00620   Pyruvate metabolism bgj00623   Toluene degradation bgj00624   Polycyclic aromatic hydrocarbon degradation bgj00625   Chloroalkane and chloroalkene degradation bgj00626   Naphthalene degradation bgj00627   Aminobenzoate degradation bgj00630   Glyoxylate and dicarboxylate metabolism bgj00633   Nitrotoluene degradation bgj00640   Propanoate metabolism bgj00643   Styrene degradation bgj00650   Butanoate metabolism bgj00660   C5-Branched dibasic acid metabolism bgj00670   One carbon pool by folate bgj00680   Methane metabolism bgj00710   Carbon fixation by Calvin cycle bgj00720   Other carbon fixation pathways bgj00730   Thiamine metabolism bgj00740   Riboflavin metabolism bgj00750   Vitamin B6 metabolism bgj00760   Nicotinate and nicotinamide metabolism bgj00770   Pantothenate and CoA biosynthesis bgj00780   Biotin metabolism bgj00785   Lipoic acid metabolism bgj00790   Folate biosynthesis bgj00791   Atrazine degradation bgj00860   Porphyrin metabolism bgj00900   Terpenoid backbone biosynthesis bgj00907   Pinene, camphor and geraniol degradation bgj00910   Nitrogen metabolism bgj00920   Sulfur metabolism bgj00946   Degradation of flavonoids bgj00999   Biosynthesis of various plant secondary metabolites bgj01040   Biosynthesis of unsaturated fatty acids bgj01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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