KEGG   PATHWAY: bon01100
Entry
bon01100                    Pathway                                
Name
Metabolic pathways - Cytobacillus oceanisediminis
Class
Pathway map
bon01100  Metabolic pathways
bon01100

Module
bon_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bon01100]
bon_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bon01100]
bon_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bon01100]
bon_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bon01100]
bon_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:bon01100]
bon_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bon01100]
bon_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bon01100]
bon_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:bon01100]
bon_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bon01100]
bon_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bon01100]
bon_M00012  Glyoxylate cycle [PATH:bon01100]
bon_M00015  Proline biosynthesis, glutamate => proline [PATH:bon01100]
bon_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:bon01100]
bon_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bon01100]
bon_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bon01100]
bon_M00021  Cysteine biosynthesis, serine => cysteine [PATH:bon01100]
bon_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bon01100]
bon_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:bon01100]
bon_M00026  Histidine biosynthesis, PRPP => histidine [PATH:bon01100]
bon_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:bon01100]
bon_M00034  Methionine salvage pathway [PATH:bon01100]
bon_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:bon01100]
bon_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bon01100]
bon_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bon01100]
bon_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bon01100]
bon_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bon01100]
bon_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bon01100]
bon_M00082  Fatty acid biosynthesis, initiation [PATH:bon01100]
bon_M00083  Fatty acid biosynthesis, elongation [PATH:bon01100]
bon_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:bon01100]
bon_M00087  beta-Oxidation [PATH:bon01100]
bon_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:bon01100]
bon_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bon01100]
bon_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:bon01100]
bon_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bon01100]
bon_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bon01100]
bon_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bon01100]
bon_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:bon01100]
bon_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bon01100]
bon_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:bon01100]
bon_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:bon01100]
bon_M00135  GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:bon01100]
bon_M00140  C1-unit interconversion, prokaryotes [PATH:bon01100]
bon_M00151  Cytochrome bc1 complex respiratory unit [PATH:bon01100]
bon_M00155  Cytochrome c oxidase, prokaryotes [PATH:bon01100]
bon_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:bon01100]
bon_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:bon01100]
bon_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bon01100]
bon_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:bon01100]
bon_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:bon01100]
bon_M00416  Cytochrome aa3-600 menaquinol oxidase [PATH:bon01100]
bon_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bon01100]
bon_M00525  Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:bon01100]
bon_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:bon01100]
bon_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bon01100]
bon_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bon01100]
bon_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:bon01100]
bon_M00621  Glycine cleavage system [PATH:bon01100]
bon_M00844  Arginine biosynthesis, ornithine => arginine [PATH:bon01100]
bon_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bon01100]
bon_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bon01100]
bon_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bon01100]
bon_M00883  Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bon01100]
bon_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:bon01100]
bon_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bon01100]
bon_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bon01100]
bon_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:bon01100]
bon_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bon01100]
bon_M00970  Proline degradation, proline => glutamate [PATH:bon01100]
bon_M00972  Proline metabolism [PATH:bon01100]
Organism
Cytobacillus oceanisediminis [GN:bon]
Related
pathway
bon00010  Glycolysis / Gluconeogenesis
bon00020  Citrate cycle (TCA cycle)
bon00030  Pentose phosphate pathway
bon00040  Pentose and glucuronate interconversions
bon00051  Fructose and mannose metabolism
bon00052  Galactose metabolism
bon00053  Ascorbate and aldarate metabolism
bon00061  Fatty acid biosynthesis
bon00071  Fatty acid degradation
bon00130  Ubiquinone and other terpenoid-quinone biosynthesis
bon00190  Oxidative phosphorylation
bon00220  Arginine biosynthesis
bon00230  Purine metabolism
bon00240  Pyrimidine metabolism
bon00250  Alanine, aspartate and glutamate metabolism
bon00260  Glycine, serine and threonine metabolism
bon00261  Monobactam biosynthesis
bon00270  Cysteine and methionine metabolism
bon00280  Valine, leucine and isoleucine degradation
bon00290  Valine, leucine and isoleucine biosynthesis
bon00300  Lysine biosynthesis
bon00310  Lysine degradation
bon00311  Penicillin and cephalosporin biosynthesis
bon00330  Arginine and proline metabolism
bon00332  Carbapenem biosynthesis
bon00340  Histidine metabolism
bon00350  Tyrosine metabolism
bon00360  Phenylalanine metabolism
bon00362  Benzoate degradation
bon00380  Tryptophan metabolism
bon00400  Phenylalanine, tyrosine and tryptophan biosynthesis
bon00401  Novobiocin biosynthesis
bon00405  Phenazine biosynthesis
bon00410  beta-Alanine metabolism
bon00430  Taurine and hypotaurine metabolism
bon00440  Phosphonate and phosphinate metabolism
bon00450  Selenocompound metabolism
bon00460  Cyanoamino acid metabolism
bon00470  D-Amino acid metabolism
bon00480  Glutathione metabolism
bon00500  Starch and sucrose metabolism
bon00520  Amino sugar and nucleotide sugar metabolism
bon00521  Streptomycin biosynthesis
bon00540  Lipopolysaccharide biosynthesis
bon00541  O-Antigen nucleotide sugar biosynthesis
bon00542  O-Antigen repeat unit biosynthesis
bon00543  Exopolysaccharide biosynthesis
bon00550  Peptidoglycan biosynthesis
bon00552  Teichoic acid biosynthesis
bon00561  Glycerolipid metabolism
bon00562  Inositol phosphate metabolism
bon00564  Glycerophospholipid metabolism
bon00592  alpha-Linolenic acid metabolism
bon00620  Pyruvate metabolism
bon00622  Xylene degradation
bon00625  Chloroalkane and chloroalkene degradation
bon00626  Naphthalene degradation
bon00627  Aminobenzoate degradation
bon00630  Glyoxylate and dicarboxylate metabolism
bon00640  Propanoate metabolism
bon00643  Styrene degradation
bon00650  Butanoate metabolism
bon00660  C5-Branched dibasic acid metabolism
bon00670  One carbon pool by folate
bon00680  Methane metabolism
bon00710  Carbon fixation by Calvin cycle
bon00720  Other carbon fixation pathways
bon00730  Thiamine metabolism
bon00740  Riboflavin metabolism
bon00750  Vitamin B6 metabolism
bon00760  Nicotinate and nicotinamide metabolism
bon00770  Pantothenate and CoA biosynthesis
bon00780  Biotin metabolism
bon00785  Lipoic acid metabolism
bon00790  Folate biosynthesis
bon00860  Porphyrin metabolism
bon00900  Terpenoid backbone biosynthesis
bon00907  Pinene, camphor and geraniol degradation
bon00910  Nitrogen metabolism
bon00920  Sulfur metabolism
bon00930  Caprolactam degradation
bon00999  Biosynthesis of various plant secondary metabolites
bon01040  Biosynthesis of unsaturated fatty acids
bon01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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