PATHWAY: bsm01100 Help Entry bsm01100                    Pathway                                 Name Metabolic pathways - Bacillus smithii Class BRITE hierarchy Pathway map bsm01100   Metabolic pathways Module bsm_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bsm01100] bsm_M00002   Glycolysis, core module involving three-carbon compounds [PATH:bsm01100] bsm_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bsm01100] bsm_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:bsm01100] bsm_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bsm01100] bsm_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:bsm01100] bsm_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bsm01100] bsm_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bsm01100] bsm_M00012   Glyoxylate cycle [PATH:bsm01100] bsm_M00015   Proline biosynthesis, glutamate => proline [PATH:bsm01100] bsm_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:bsm01100] bsm_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bsm01100] bsm_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bsm01100] bsm_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:bsm01100] bsm_M00021   Cysteine biosynthesis, serine => cysteine [PATH:bsm01100] bsm_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bsm01100] bsm_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:bsm01100] bsm_M00026   Histidine biosynthesis, PRPP => histidine [PATH:bsm01100] bsm_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:bsm01100] bsm_M00034   Methionine salvage pathway [PATH:bsm01100] bsm_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:bsm01100] bsm_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bsm01100] bsm_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bsm01100] bsm_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bsm01100] bsm_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bsm01100] bsm_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bsm01100] bsm_M00082   Fatty acid biosynthesis, initiation [PATH:bsm01100] bsm_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:bsm01100] bsm_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bsm01100] bsm_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bsm01100] bsm_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bsm01100] bsm_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:bsm01100] bsm_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:bsm01100] bsm_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:bsm01100] bsm_M00140   C1-unit interconversion, prokaryotes [PATH:bsm01100] bsm_M00151   Cytochrome bc1 complex respiratory unit [PATH:bsm01100] bsm_M00155   Cytochrome c oxidase, prokaryotes [PATH:bsm01100] bsm_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:bsm01100] bsm_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bsm01100] bsm_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:bsm01100] bsm_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bsm01100] bsm_M00525   Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:bsm01100] bsm_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bsm01100] bsm_M00569   Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA [PATH:bsm01100] bsm_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bsm01100] bsm_M00609   Cysteine biosynthesis, methionine => cysteine [PATH:bsm01100] bsm_M00621   Glycine cleavage system [PATH:bsm01100] bsm_M00844   Arginine biosynthesis, ornithine => arginine [PATH:bsm01100] bsm_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bsm01100] bsm_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bsm01100] bsm_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bsm01100] bsm_M00883   Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bsm01100] bsm_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:bsm01100] bsm_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bsm01100] bsm_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bsm01100] bsm_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bsm01100] bsm_M00970   Proline degradation, proline => glutamate [PATH:bsm01100] Organism Bacillus smithii [GN:bsm] Related pathway bsm00010   Glycolysis / Gluconeogenesis bsm00020   Citrate cycle (TCA cycle) bsm00030   Pentose phosphate pathway bsm00040   Pentose and glucuronate interconversions bsm00051   Fructose and mannose metabolism bsm00052   Galactose metabolism bsm00053   Ascorbate and aldarate metabolism bsm00061   Fatty acid biosynthesis bsm00071   Fatty acid degradation bsm00130   Ubiquinone and other terpenoid-quinone biosynthesis bsm00190   Oxidative phosphorylation bsm00220   Arginine biosynthesis bsm00230   Purine metabolism bsm00240   Pyrimidine metabolism bsm00250   Alanine, aspartate and glutamate metabolism bsm00260   Glycine, serine and threonine metabolism bsm00261   Monobactam biosynthesis bsm00270   Cysteine and methionine metabolism bsm00280   Valine, leucine and isoleucine degradation bsm00290   Valine, leucine and isoleucine biosynthesis bsm00300   Lysine biosynthesis bsm00310   Lysine degradation bsm00330   Arginine and proline metabolism bsm00332   Carbapenem biosynthesis bsm00340   Histidine metabolism bsm00350   Tyrosine metabolism bsm00360   Phenylalanine metabolism bsm00361   Chlorocyclohexane and chlorobenzene degradation bsm00362   Benzoate degradation bsm00380   Tryptophan metabolism bsm00400   Phenylalanine, tyrosine and tryptophan biosynthesis bsm00401   Novobiocin biosynthesis bsm00410   beta-Alanine metabolism bsm00430   Taurine and hypotaurine metabolism bsm00450   Selenocompound metabolism bsm00460   Cyanoamino acid metabolism bsm00470   D-Amino acid metabolism bsm00480   Glutathione metabolism bsm00500   Starch and sucrose metabolism bsm00520   Amino sugar and nucleotide sugar metabolism bsm00521   Streptomycin biosynthesis bsm00541   O-Antigen nucleotide sugar biosynthesis bsm00542   O-Antigen repeat unit biosynthesis bsm00543   Exopolysaccharide biosynthesis bsm00550   Peptidoglycan biosynthesis bsm00552   Teichoic acid biosynthesis bsm00561   Glycerolipid metabolism bsm00562   Inositol phosphate metabolism bsm00564   Glycerophospholipid metabolism bsm00592   alpha-Linolenic acid metabolism bsm00600   Sphingolipid metabolism bsm00620   Pyruvate metabolism bsm00621   Dioxin degradation bsm00622   Xylene degradation bsm00625   Chloroalkane and chloroalkene degradation bsm00626   Naphthalene degradation bsm00627   Aminobenzoate degradation bsm00630   Glyoxylate and dicarboxylate metabolism bsm00640   Propanoate metabolism bsm00643   Styrene degradation bsm00650   Butanoate metabolism bsm00660   C5-Branched dibasic acid metabolism bsm00670   One carbon pool by folate bsm00680   Methane metabolism bsm00710   Carbon fixation by Calvin cycle bsm00720   Other carbon fixation pathways bsm00730   Thiamine metabolism bsm00740   Riboflavin metabolism bsm00750   Vitamin B6 metabolism bsm00760   Nicotinate and nicotinamide metabolism bsm00770   Pantothenate and CoA biosynthesis bsm00780   Biotin metabolism bsm00785   Lipoic acid metabolism bsm00790   Folate biosynthesis bsm00860   Porphyrin metabolism bsm00900   Terpenoid backbone biosynthesis bsm00903   Limonene degradation bsm00907   Pinene, camphor and geraniol degradation bsm00910   Nitrogen metabolism bsm00920   Sulfur metabolism bsm00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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