PATHWAY: bson01100 Help Entry bson01100                   Pathway                                 Name Metabolic pathways - Bacillus sonorensis Class BRITE hierarchy Pathway map bson01100   Metabolic pathways Module bson_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bson01100] bson_M00002   Glycolysis, core module involving three-carbon compounds [PATH:bson01100] bson_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bson01100] bson_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bson01100] bson_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:bson01100] bson_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bson01100] bson_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bson01100] bson_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:bson01100] bson_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bson01100] bson_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bson01100] bson_M00012   Glyoxylate cycle [PATH:bson01100] bson_M00015   Proline biosynthesis, glutamate => proline [PATH:bson01100] bson_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:bson01100] bson_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bson01100] bson_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bson01100] bson_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:bson01100] bson_M00021   Cysteine biosynthesis, serine => cysteine [PATH:bson01100] bson_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bson01100] bson_M00026   Histidine biosynthesis, PRPP => histidine [PATH:bson01100] bson_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:bson01100] bson_M00034   Methionine salvage pathway [PATH:bson01100] bson_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bson01100] bson_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bson01100] bson_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bson01100] bson_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bson01100] bson_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bson01100] bson_M00082   Fatty acid biosynthesis, initiation [PATH:bson01100] bson_M00083   Fatty acid biosynthesis, elongation [PATH:bson01100] bson_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:bson01100] bson_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bson01100] bson_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:bson01100] bson_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bson01100] bson_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bson01100] bson_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bson01100] bson_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:bson01100] bson_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bson01100] bson_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bson01100] bson_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:bson01100] bson_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:bson01100] bson_M00135   GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:bson01100] bson_M00140   C1-unit interconversion, prokaryotes [PATH:bson01100] bson_M00151   Cytochrome bc1 complex respiratory unit [PATH:bson01100] bson_M00155   Cytochrome c oxidase, prokaryotes [PATH:bson01100] bson_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:bson01100] bson_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:bson01100] bson_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bson01100] bson_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:bson01100] bson_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:bson01100] bson_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:bson01100] bson_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bson01100] bson_M00525   Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:bson01100] bson_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:bson01100] bson_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bson01100] bson_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:bson01100] bson_M00555   Betaine biosynthesis, choline => betaine [PATH:bson01100] bson_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bson01100] bson_M00573   Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin [PATH:bson01100] bson_M00577   Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:bson01100] bson_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:bson01100] bson_M00609   Cysteine biosynthesis, methionine => cysteine [PATH:bson01100] bson_M00621   Glycine cleavage system [PATH:bson01100] bson_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:bson01100] bson_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:bson01100] bson_M00844   Arginine biosynthesis, ornithine => arginine [PATH:bson01100] bson_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bson01100] bson_M00877   Kanosamine biosynthesis, glucose 6-phosphate => kanosamine [PATH:bson01100] bson_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bson01100] bson_M00883   Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bson01100] bson_M00895   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/glycine) => TMP/TPP [PATH:bson01100] bson_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:bson01100] bson_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bson01100] bson_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bson01100] bson_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bson01100] bson_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:bson01100] bson_M00949   Staphylopine biosynthesis, L-histidine => staphylopine [PATH:bson01100] bson_M00970   Proline degradation, proline => glutamate [PATH:bson01100] bson_M00972   Proline metabolism [PATH:bson01100] Organism Bacillus sonorensis [GN:bson] Related pathway bson00010   Glycolysis / Gluconeogenesis bson00020   Citrate cycle (TCA cycle) bson00030   Pentose phosphate pathway bson00040   Pentose and glucuronate interconversions bson00051   Fructose and mannose metabolism bson00052   Galactose metabolism bson00053   Ascorbate and aldarate metabolism bson00061   Fatty acid biosynthesis bson00071   Fatty acid degradation bson00130   Ubiquinone and other terpenoid-quinone biosynthesis bson00190   Oxidative phosphorylation bson00220   Arginine biosynthesis bson00230   Purine metabolism bson00240   Pyrimidine metabolism bson00250   Alanine, aspartate and glutamate metabolism bson00260   Glycine, serine and threonine metabolism bson00261   Monobactam biosynthesis bson00270   Cysteine and methionine metabolism bson00280   Valine, leucine and isoleucine degradation bson00290   Valine, leucine and isoleucine biosynthesis bson00300   Lysine biosynthesis bson00310   Lysine degradation bson00311   Penicillin and cephalosporin biosynthesis bson00330   Arginine and proline metabolism bson00332   Carbapenem biosynthesis bson00340   Histidine metabolism bson00350   Tyrosine metabolism bson00360   Phenylalanine metabolism bson00361   Chlorocyclohexane and chlorobenzene degradation bson00362   Benzoate degradation bson00380   Tryptophan metabolism bson00400   Phenylalanine, tyrosine and tryptophan biosynthesis bson00401   Novobiocin biosynthesis bson00410   beta-Alanine metabolism bson00430   Taurine and hypotaurine metabolism bson00450   Selenocompound metabolism bson00460   Cyanoamino acid metabolism bson00470   D-Amino acid metabolism bson00480   Glutathione metabolism bson00500   Starch and sucrose metabolism bson00511   Other glycan degradation bson00520   Amino sugar and nucleotide sugar metabolism bson00521   Streptomycin biosynthesis bson00541   O-Antigen nucleotide sugar biosynthesis bson00542   O-Antigen repeat unit biosynthesis bson00543   Exopolysaccharide biosynthesis bson00550   Peptidoglycan biosynthesis bson00552   Teichoic acid biosynthesis bson00561   Glycerolipid metabolism bson00562   Inositol phosphate metabolism bson00564   Glycerophospholipid metabolism bson00592   alpha-Linolenic acid metabolism bson00620   Pyruvate metabolism bson00621   Dioxin degradation bson00622   Xylene degradation bson00625   Chloroalkane and chloroalkene degradation bson00626   Naphthalene degradation bson00627   Aminobenzoate degradation bson00630   Glyoxylate and dicarboxylate metabolism bson00640   Propanoate metabolism bson00643   Styrene degradation bson00650   Butanoate metabolism bson00660   C5-Branched dibasic acid metabolism bson00670   One carbon pool by folate bson00680   Methane metabolism bson00710   Carbon fixation by Calvin cycle bson00720   Other carbon fixation pathways bson00730   Thiamine metabolism bson00740   Riboflavin metabolism bson00750   Vitamin B6 metabolism bson00760   Nicotinate and nicotinamide metabolism bson00770   Pantothenate and CoA biosynthesis bson00780   Biotin metabolism bson00785   Lipoic acid metabolism bson00790   Folate biosynthesis bson00860   Porphyrin metabolism bson00900   Terpenoid backbone biosynthesis bson00907   Pinene, camphor and geraniol degradation bson00910   Nitrogen metabolism bson00920   Sulfur metabolism bson00946   Degradation of flavonoids bson00998   Biosynthesis of various antibiotics bson00999   Biosynthesis of various plant secondary metabolites bson01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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