PATHWAY: caby01100 Help Entry caby01100                   Pathway                                 Name Metabolic pathways - Caldithrix abyssi Class BRITE hierarchy Pathway map caby01100   Metabolic pathways Module caby_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:caby01100] caby_M00002   Glycolysis, core module involving three-carbon compounds [PATH:caby01100] caby_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:caby01100] caby_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:caby01100] caby_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:caby01100] caby_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:caby01100] caby_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:caby01100] caby_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:caby01100] caby_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:caby01100] caby_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:caby01100] caby_M00021   Cysteine biosynthesis, serine => cysteine [PATH:caby01100] caby_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:caby01100] caby_M00026   Histidine biosynthesis, PRPP => histidine [PATH:caby01100] caby_M00035   Methionine degradation [PATH:caby01100] caby_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:caby01100] caby_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:caby01100] caby_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:caby01100] caby_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:caby01100] caby_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:caby01100] caby_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:caby01100] caby_M00063   CMP-KDO biosynthesis [PATH:caby01100] caby_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:caby01100] caby_M00082   Fatty acid biosynthesis, initiation [PATH:caby01100] caby_M00083   Fatty acid biosynthesis, elongation [PATH:caby01100] caby_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:caby01100] caby_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:caby01100] caby_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:caby01100] caby_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:caby01100] caby_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:caby01100] caby_M00155   Cytochrome c oxidase, prokaryotes [PATH:caby01100] caby_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:caby01100] caby_M00169   CAM (Crassulacean acid metabolism), light [PATH:caby01100] caby_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:caby01100] caby_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:caby01100] caby_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:caby01100] caby_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:caby01100] caby_M00621   Glycine cleavage system [PATH:caby01100] caby_M00793   dTDP-L-rhamnose biosynthesis [PATH:caby01100] caby_M00844   Arginine biosynthesis, ornithine => arginine [PATH:caby01100] caby_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:caby01100] caby_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:caby01100] caby_M00970   Proline degradation, proline => glutamate [PATH:caby01100] caby_M00972   Proline metabolism [PATH:caby01100] Organism Caldithrix abyssi [GN:caby] Related pathway caby00010   Glycolysis / Gluconeogenesis caby00020   Citrate cycle (TCA cycle) caby00030   Pentose phosphate pathway caby00040   Pentose and glucuronate interconversions caby00051   Fructose and mannose metabolism caby00052   Galactose metabolism caby00053   Ascorbate and aldarate metabolism caby00061   Fatty acid biosynthesis caby00071   Fatty acid degradation caby00100   Steroid biosynthesis caby00130   Ubiquinone and other terpenoid-quinone biosynthesis caby00190   Oxidative phosphorylation caby00220   Arginine biosynthesis caby00230   Purine metabolism caby00240   Pyrimidine metabolism caby00250   Alanine, aspartate and glutamate metabolism caby00260   Glycine, serine and threonine metabolism caby00261   Monobactam biosynthesis caby00270   Cysteine and methionine metabolism caby00280   Valine, leucine and isoleucine degradation caby00290   Valine, leucine and isoleucine biosynthesis caby00300   Lysine biosynthesis caby00310   Lysine degradation caby00330   Arginine and proline metabolism caby00340   Histidine metabolism caby00350   Tyrosine metabolism caby00360   Phenylalanine metabolism caby00362   Benzoate degradation caby00380   Tryptophan metabolism caby00400   Phenylalanine, tyrosine and tryptophan biosynthesis caby00401   Novobiocin biosynthesis caby00410   beta-Alanine metabolism caby00430   Taurine and hypotaurine metabolism caby00450   Selenocompound metabolism caby00460   Cyanoamino acid metabolism caby00470   D-Amino acid metabolism caby00480   Glutathione metabolism caby00500   Starch and sucrose metabolism caby00511   Other glycan degradation caby00520   Amino sugar and nucleotide sugar metabolism caby00521   Streptomycin biosynthesis caby00523   Polyketide sugar unit biosynthesis caby00525   Acarbose and validamycin biosynthesis caby00540   Lipopolysaccharide biosynthesis caby00541   O-Antigen nucleotide sugar biosynthesis caby00542   O-Antigen repeat unit biosynthesis caby00543   Exopolysaccharide biosynthesis caby00550   Peptidoglycan biosynthesis caby00552   Teichoic acid biosynthesis caby00561   Glycerolipid metabolism caby00562   Inositol phosphate metabolism caby00564   Glycerophospholipid metabolism caby00600   Sphingolipid metabolism caby00620   Pyruvate metabolism caby00625   Chloroalkane and chloroalkene degradation caby00626   Naphthalene degradation caby00627   Aminobenzoate degradation caby00630   Glyoxylate and dicarboxylate metabolism caby00640   Propanoate metabolism caby00650   Butanoate metabolism caby00660   C5-Branched dibasic acid metabolism caby00670   One carbon pool by folate caby00680   Methane metabolism caby00710   Carbon fixation by Calvin cycle caby00720   Other carbon fixation pathways caby00730   Thiamine metabolism caby00740   Riboflavin metabolism caby00750   Vitamin B6 metabolism caby00760   Nicotinate and nicotinamide metabolism caby00770   Pantothenate and CoA biosynthesis caby00780   Biotin metabolism caby00785   Lipoic acid metabolism caby00790   Folate biosynthesis caby00860   Porphyrin metabolism caby00900   Terpenoid backbone biosynthesis caby00907   Pinene, camphor and geraniol degradation caby00909   Sesquiterpenoid and triterpenoid biosynthesis caby00910   Nitrogen metabolism caby00920   Sulfur metabolism caby00930   Caprolactam degradation caby00946   Degradation of flavonoids caby00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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