PATHWAY: cbra01100 Help Entry cbra01100                   Pathway                                 Name Metabolic pathways - Citrobacter braakii Class BRITE hierarchy Pathway map cbra01100   Metabolic pathways Module cbra_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cbra01100] cbra_M00002   Glycolysis, core module involving three-carbon compounds [PATH:cbra01100] cbra_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cbra01100] cbra_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cbra01100] cbra_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:cbra01100] cbra_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cbra01100] cbra_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cbra01100] cbra_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:cbra01100] cbra_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:cbra01100] cbra_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cbra01100] cbra_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cbra01100] cbra_M00012   Glyoxylate cycle [PATH:cbra01100] cbra_M00015   Proline biosynthesis, glutamate => proline [PATH:cbra01100] cbra_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cbra01100] cbra_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:cbra01100] cbra_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cbra01100] cbra_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cbra01100] cbra_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:cbra01100] cbra_M00021   Cysteine biosynthesis, serine => cysteine [PATH:cbra01100] cbra_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cbra01100] cbra_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:cbra01100] cbra_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:cbra01100] cbra_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:cbra01100] cbra_M00026   Histidine biosynthesis, PRPP => histidine [PATH:cbra01100] cbra_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:cbra01100] cbra_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:cbra01100] cbra_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cbra01100] cbra_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cbra01100] cbra_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cbra01100] cbra_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:cbra01100] cbra_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cbra01100] cbra_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cbra01100] cbra_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:cbra01100] cbra_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cbra01100] cbra_M00063   CMP-KDO biosynthesis [PATH:cbra01100] cbra_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:cbra01100] cbra_M00082   Fatty acid biosynthesis, initiation [PATH:cbra01100] cbra_M00083   Fatty acid biosynthesis, elongation [PATH:cbra01100] cbra_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:cbra01100] cbra_M00087   beta-Oxidation [PATH:cbra01100] cbra_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cbra01100] cbra_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:cbra01100] cbra_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cbra01100] cbra_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:cbra01100] cbra_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cbra01100] cbra_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:cbra01100] cbra_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cbra01100] cbra_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:cbra01100] cbra_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cbra01100] cbra_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:cbra01100] cbra_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cbra01100] cbra_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:cbra01100] cbra_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cbra01100] cbra_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:cbra01100] cbra_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:cbra01100] cbra_M00136   GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:cbra01100] cbra_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:cbra01100] cbra_M00149   Succinate dehydrogenase, prokaryotes [PATH:cbra01100] cbra_M00150   Fumarate reductase, prokaryotes [PATH:cbra01100] cbra_M00151   Cytochrome bc1 complex respiratory unit [PATH:cbra01100] cbra_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:cbra01100] cbra_M00168   CAM (Crassulacean acid metabolism), dark [PATH:cbra01100] cbra_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:cbra01100] cbra_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cbra01100] cbra_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:cbra01100] cbra_M00417   Cytochrome o ubiquinol oxidase [PATH:cbra01100] cbra_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cbra01100] cbra_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:cbra01100] cbra_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:cbra01100] cbra_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:cbra01100] cbra_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cbra01100] cbra_M00550   Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:cbra01100] cbra_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cbra01100] cbra_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cbra01100] cbra_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:cbra01100] cbra_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:cbra01100] cbra_M00621   Glycine cleavage system [PATH:cbra01100] cbra_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cbra01100] cbra_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cbra01100] cbra_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:cbra01100] cbra_M00793   dTDP-L-rhamnose biosynthesis [PATH:cbra01100] cbra_M00844   Arginine biosynthesis, ornithine => arginine [PATH:cbra01100] cbra_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cbra01100] cbra_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cbra01100] cbra_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:cbra01100] cbra_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:cbra01100] cbra_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cbra01100] cbra_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cbra01100] cbra_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:cbra01100] cbra_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cbra01100] cbra_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:cbra01100] cbra_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cbra01100] cbra_M00956   Lysine degradation, bacteria, L-lysine => succinate [PATH:cbra01100] cbra_M00970   Proline degradation, proline => glutamate [PATH:cbra01100] Organism Citrobacter braakii [GN:cbra] Related pathway cbra00010   Glycolysis / Gluconeogenesis cbra00020   Citrate cycle (TCA cycle) cbra00030   Pentose phosphate pathway cbra00040   Pentose and glucuronate interconversions cbra00051   Fructose and mannose metabolism cbra00052   Galactose metabolism cbra00053   Ascorbate and aldarate metabolism cbra00061   Fatty acid biosynthesis cbra00071   Fatty acid degradation cbra00130   Ubiquinone and other terpenoid-quinone biosynthesis cbra00190   Oxidative phosphorylation cbra00220   Arginine biosynthesis cbra00230   Purine metabolism cbra00240   Pyrimidine metabolism cbra00250   Alanine, aspartate and glutamate metabolism cbra00260   Glycine, serine and threonine metabolism cbra00261   Monobactam biosynthesis cbra00270   Cysteine and methionine metabolism cbra00280   Valine, leucine and isoleucine degradation cbra00290   Valine, leucine and isoleucine biosynthesis cbra00300   Lysine biosynthesis cbra00310   Lysine degradation cbra00330   Arginine and proline metabolism cbra00332   Carbapenem biosynthesis cbra00340   Histidine metabolism cbra00350   Tyrosine metabolism cbra00360   Phenylalanine metabolism cbra00361   Chlorocyclohexane and chlorobenzene degradation cbra00362   Benzoate degradation cbra00364   Fluorobenzoate degradation cbra00380   Tryptophan metabolism cbra00400   Phenylalanine, tyrosine and tryptophan biosynthesis cbra00401   Novobiocin biosynthesis cbra00410   beta-Alanine metabolism cbra00430   Taurine and hypotaurine metabolism cbra00440   Phosphonate and phosphinate metabolism cbra00450   Selenocompound metabolism cbra00460   Cyanoamino acid metabolism cbra00470   D-Amino acid metabolism cbra00480   Glutathione metabolism cbra00500   Starch and sucrose metabolism cbra00511   Other glycan degradation cbra00520   Amino sugar and nucleotide sugar metabolism cbra00521   Streptomycin biosynthesis cbra00523   Polyketide sugar unit biosynthesis cbra00525   Acarbose and validamycin biosynthesis cbra00540   Lipopolysaccharide biosynthesis cbra00541   O-Antigen nucleotide sugar biosynthesis cbra00542   O-Antigen repeat unit biosynthesis cbra00543   Exopolysaccharide biosynthesis cbra00550   Peptidoglycan biosynthesis cbra00552   Teichoic acid biosynthesis cbra00561   Glycerolipid metabolism cbra00562   Inositol phosphate metabolism cbra00564   Glycerophospholipid metabolism cbra00565   Ether lipid metabolism cbra00592   alpha-Linolenic acid metabolism cbra00600   Sphingolipid metabolism cbra00620   Pyruvate metabolism cbra00623   Toluene degradation cbra00625   Chloroalkane and chloroalkene degradation cbra00626   Naphthalene degradation cbra00627   Aminobenzoate degradation cbra00630   Glyoxylate and dicarboxylate metabolism cbra00633   Nitrotoluene degradation cbra00640   Propanoate metabolism cbra00650   Butanoate metabolism cbra00660   C5-Branched dibasic acid metabolism cbra00670   One carbon pool by folate cbra00680   Methane metabolism cbra00710   Carbon fixation by Calvin cycle cbra00720   Other carbon fixation pathways cbra00730   Thiamine metabolism cbra00740   Riboflavin metabolism cbra00750   Vitamin B6 metabolism cbra00760   Nicotinate and nicotinamide metabolism cbra00770   Pantothenate and CoA biosynthesis cbra00780   Biotin metabolism cbra00785   Lipoic acid metabolism cbra00790   Folate biosynthesis cbra00860   Porphyrin metabolism cbra00900   Terpenoid backbone biosynthesis cbra00907   Pinene, camphor and geraniol degradation cbra00910   Nitrogen metabolism cbra00920   Sulfur metabolism cbra00930   Caprolactam degradation cbra00946   Degradation of flavonoids cbra00999   Biosynthesis of various plant secondary metabolites cbra01040   Biosynthesis of unsaturated fatty acids cbra01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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