PATHWAY: cdy01100 Help Entry cdy01100                    Pathway                                 Name Metabolic pathways - Clostridium diolis Class BRITE hierarchy Pathway map cdy01100   Metabolic pathways Module cdy_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cdy01100] cdy_M00002   Glycolysis, core module involving three-carbon compounds [PATH:cdy01100] cdy_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:cdy01100] cdy_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cdy01100] cdy_M00015   Proline biosynthesis, glutamate => proline [PATH:cdy01100] cdy_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:cdy01100] cdy_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cdy01100] cdy_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cdy01100] cdy_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:cdy01100] cdy_M00021   Cysteine biosynthesis, serine => cysteine [PATH:cdy01100] cdy_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:cdy01100] cdy_M00026   Histidine biosynthesis, PRPP => histidine [PATH:cdy01100] cdy_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:cdy01100] cdy_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cdy01100] cdy_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cdy01100] cdy_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cdy01100] cdy_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:cdy01100] cdy_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cdy01100] cdy_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cdy01100] cdy_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cdy01100] cdy_M00082   Fatty acid biosynthesis, initiation [PATH:cdy01100] cdy_M00083   Fatty acid biosynthesis, elongation [PATH:cdy01100] cdy_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:cdy01100] cdy_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cdy01100] cdy_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cdy01100] cdy_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cdy01100] cdy_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:cdy01100] cdy_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:cdy01100] cdy_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cdy01100] cdy_M00135   GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:cdy01100] cdy_M00140   C1-unit interconversion, prokaryotes [PATH:cdy01100] cdy_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:cdy01100] cdy_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:cdy01100] cdy_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cdy01100] cdy_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:cdy01100] cdy_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:cdy01100] cdy_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cdy01100] cdy_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cdy01100] cdy_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cdy01100] cdy_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cdy01100] cdy_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:cdy01100] cdy_M00580   Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:cdy01100] cdy_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cdy01100] cdy_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cdy01100] cdy_M00793   dTDP-L-rhamnose biosynthesis [PATH:cdy01100] cdy_M00844   Arginine biosynthesis, ornithine => arginine [PATH:cdy01100] cdy_M00847   Heme biosynthesis, archaea, siroheme => heme [PATH:cdy01100] cdy_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:cdy01100] cdy_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:cdy01100] cdy_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cdy01100] cdy_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:cdy01100] cdy_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:cdy01100] cdy_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cdy01100] Organism Clostridium diolis [GN:cdy] Related pathway cdy00010   Glycolysis / Gluconeogenesis cdy00020   Citrate cycle (TCA cycle) cdy00030   Pentose phosphate pathway cdy00040   Pentose and glucuronate interconversions cdy00051   Fructose and mannose metabolism cdy00052   Galactose metabolism cdy00053   Ascorbate and aldarate metabolism cdy00061   Fatty acid biosynthesis cdy00071   Fatty acid degradation cdy00074   Mycolic acid biosynthesis cdy00130   Ubiquinone and other terpenoid-quinone biosynthesis cdy00190   Oxidative phosphorylation cdy00220   Arginine biosynthesis cdy00230   Purine metabolism cdy00240   Pyrimidine metabolism cdy00250   Alanine, aspartate and glutamate metabolism cdy00260   Glycine, serine and threonine metabolism cdy00261   Monobactam biosynthesis cdy00270   Cysteine and methionine metabolism cdy00280   Valine, leucine and isoleucine degradation cdy00290   Valine, leucine and isoleucine biosynthesis cdy00300   Lysine biosynthesis cdy00310   Lysine degradation cdy00311   Penicillin and cephalosporin biosynthesis cdy00330   Arginine and proline metabolism cdy00332   Carbapenem biosynthesis cdy00340   Histidine metabolism cdy00350   Tyrosine metabolism cdy00360   Phenylalanine metabolism cdy00362   Benzoate degradation cdy00380   Tryptophan metabolism cdy00400   Phenylalanine, tyrosine and tryptophan biosynthesis cdy00401   Novobiocin biosynthesis cdy00410   beta-Alanine metabolism cdy00430   Taurine and hypotaurine metabolism cdy00440   Phosphonate and phosphinate metabolism cdy00450   Selenocompound metabolism cdy00460   Cyanoamino acid metabolism cdy00470   D-Amino acid metabolism cdy00480   Glutathione metabolism cdy00500   Starch and sucrose metabolism cdy00511   Other glycan degradation cdy00520   Amino sugar and nucleotide sugar metabolism cdy00521   Streptomycin biosynthesis cdy00523   Polyketide sugar unit biosynthesis cdy00525   Acarbose and validamycin biosynthesis cdy00540   Lipopolysaccharide biosynthesis cdy00541   O-Antigen nucleotide sugar biosynthesis cdy00543   Exopolysaccharide biosynthesis cdy00550   Peptidoglycan biosynthesis cdy00552   Teichoic acid biosynthesis cdy00561   Glycerolipid metabolism cdy00562   Inositol phosphate metabolism cdy00564   Glycerophospholipid metabolism cdy00600   Sphingolipid metabolism cdy00620   Pyruvate metabolism cdy00622   Xylene degradation cdy00625   Chloroalkane and chloroalkene degradation cdy00626   Naphthalene degradation cdy00627   Aminobenzoate degradation cdy00630   Glyoxylate and dicarboxylate metabolism cdy00633   Nitrotoluene degradation cdy00640   Propanoate metabolism cdy00650   Butanoate metabolism cdy00660   C5-Branched dibasic acid metabolism cdy00670   One carbon pool by folate cdy00680   Methane metabolism cdy00710   Carbon fixation by Calvin cycle cdy00720   Other carbon fixation pathways cdy00730   Thiamine metabolism cdy00740   Riboflavin metabolism cdy00750   Vitamin B6 metabolism cdy00760   Nicotinate and nicotinamide metabolism cdy00770   Pantothenate and CoA biosynthesis cdy00780   Biotin metabolism cdy00790   Folate biosynthesis cdy00860   Porphyrin metabolism cdy00900   Terpenoid backbone biosynthesis cdy00910   Nitrogen metabolism cdy00920   Sulfur metabolism cdy00946   Degradation of flavonoids cdy00998   Biosynthesis of various antibiotics cdy00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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