PATHWAY: cem01100 Help Entry cem01100                    Pathway                                 Name Metabolic pathways - Cedecea neteri M006 Class BRITE hierarchy Pathway map cem01100   Metabolic pathways Module cem_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cem01100] cem_M00002   Glycolysis, core module involving three-carbon compounds [PATH:cem01100] cem_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cem01100] cem_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cem01100] cem_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:cem01100] cem_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cem01100] cem_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cem01100] cem_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:cem01100] cem_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:cem01100] cem_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cem01100] cem_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cem01100] cem_M00012   Glyoxylate cycle [PATH:cem01100] cem_M00015   Proline biosynthesis, glutamate => proline [PATH:cem01100] cem_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cem01100] cem_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:cem01100] cem_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cem01100] cem_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cem01100] cem_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:cem01100] cem_M00021   Cysteine biosynthesis, serine => cysteine [PATH:cem01100] cem_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cem01100] cem_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:cem01100] cem_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:cem01100] cem_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:cem01100] cem_M00026   Histidine biosynthesis, PRPP => histidine [PATH:cem01100] cem_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:cem01100] cem_M00035   Methionine degradation [PATH:cem01100] cem_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:cem01100] cem_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cem01100] cem_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cem01100] cem_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cem01100] cem_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:cem01100] cem_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cem01100] cem_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cem01100] cem_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:cem01100] cem_M00063   CMP-KDO biosynthesis [PATH:cem01100] cem_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:cem01100] cem_M00082   Fatty acid biosynthesis, initiation [PATH:cem01100] cem_M00083   Fatty acid biosynthesis, elongation [PATH:cem01100] cem_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:cem01100] cem_M00087   beta-Oxidation [PATH:cem01100] cem_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cem01100] cem_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:cem01100] cem_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cem01100] cem_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:cem01100] cem_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cem01100] cem_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:cem01100] cem_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cem01100] cem_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cem01100] cem_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:cem01100] cem_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cem01100] cem_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:cem01100] cem_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:cem01100] cem_M00136   GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:cem01100] cem_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:cem01100] cem_M00149   Succinate dehydrogenase, prokaryotes [PATH:cem01100] cem_M00150   Fumarate reductase, prokaryotes [PATH:cem01100] cem_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:cem01100] cem_M00168   CAM (Crassulacean acid metabolism), dark [PATH:cem01100] cem_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:cem01100] cem_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cem01100] cem_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:cem01100] cem_M00417   Cytochrome o ubiquinol oxidase [PATH:cem01100] cem_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cem01100] cem_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:cem01100] cem_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cem01100] cem_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:cem01100] cem_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cem01100] cem_M00555   Betaine biosynthesis, choline => betaine [PATH:cem01100] cem_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cem01100] cem_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:cem01100] cem_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:cem01100] cem_M00621   Glycine cleavage system [PATH:cem01100] cem_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cem01100] cem_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:cem01100] cem_M00844   Arginine biosynthesis, ornithine => arginine [PATH:cem01100] cem_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cem01100] cem_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cem01100] cem_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:cem01100] cem_M00878   Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA [PATH:cem01100] cem_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:cem01100] cem_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cem01100] cem_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cem01100] cem_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:cem01100] cem_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cem01100] cem_M00918   Aerobactin biosynthesis, lysine => aerobactin [PATH:cem01100] cem_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cem01100] cem_M00970   Proline degradation, proline => glutamate [PATH:cem01100] Organism Cedecea neteri M006 [GN:cem] Related pathway cem00010   Glycolysis / Gluconeogenesis cem00020   Citrate cycle (TCA cycle) cem00030   Pentose phosphate pathway cem00040   Pentose and glucuronate interconversions cem00051   Fructose and mannose metabolism cem00052   Galactose metabolism cem00053   Ascorbate and aldarate metabolism cem00061   Fatty acid biosynthesis cem00071   Fatty acid degradation cem00130   Ubiquinone and other terpenoid-quinone biosynthesis cem00190   Oxidative phosphorylation cem00220   Arginine biosynthesis cem00230   Purine metabolism cem00240   Pyrimidine metabolism cem00250   Alanine, aspartate and glutamate metabolism cem00260   Glycine, serine and threonine metabolism cem00261   Monobactam biosynthesis cem00270   Cysteine and methionine metabolism cem00280   Valine, leucine and isoleucine degradation cem00290   Valine, leucine and isoleucine biosynthesis cem00300   Lysine biosynthesis cem00310   Lysine degradation cem00330   Arginine and proline metabolism cem00332   Carbapenem biosynthesis cem00340   Histidine metabolism cem00350   Tyrosine metabolism cem00360   Phenylalanine metabolism cem00361   Chlorocyclohexane and chlorobenzene degradation cem00362   Benzoate degradation cem00364   Fluorobenzoate degradation cem00380   Tryptophan metabolism cem00400   Phenylalanine, tyrosine and tryptophan biosynthesis cem00401   Novobiocin biosynthesis cem00410   beta-Alanine metabolism cem00430   Taurine and hypotaurine metabolism cem00440   Phosphonate and phosphinate metabolism cem00450   Selenocompound metabolism cem00460   Cyanoamino acid metabolism cem00470   D-Amino acid metabolism cem00480   Glutathione metabolism cem00500   Starch and sucrose metabolism cem00511   Other glycan degradation cem00520   Amino sugar and nucleotide sugar metabolism cem00521   Streptomycin biosynthesis cem00523   Polyketide sugar unit biosynthesis cem00525   Acarbose and validamycin biosynthesis cem00540   Lipopolysaccharide biosynthesis cem00541   O-Antigen nucleotide sugar biosynthesis cem00542   O-Antigen repeat unit biosynthesis cem00543   Exopolysaccharide biosynthesis cem00550   Peptidoglycan biosynthesis cem00552   Teichoic acid biosynthesis cem00561   Glycerolipid metabolism cem00562   Inositol phosphate metabolism cem00564   Glycerophospholipid metabolism cem00565   Ether lipid metabolism cem00592   alpha-Linolenic acid metabolism cem00600   Sphingolipid metabolism cem00620   Pyruvate metabolism cem00623   Toluene degradation cem00625   Chloroalkane and chloroalkene degradation cem00626   Naphthalene degradation cem00627   Aminobenzoate degradation cem00630   Glyoxylate and dicarboxylate metabolism cem00633   Nitrotoluene degradation cem00640   Propanoate metabolism cem00650   Butanoate metabolism cem00660   C5-Branched dibasic acid metabolism cem00670   One carbon pool by folate cem00680   Methane metabolism cem00710   Carbon fixation by Calvin cycle cem00720   Other carbon fixation pathways cem00730   Thiamine metabolism cem00740   Riboflavin metabolism cem00750   Vitamin B6 metabolism cem00760   Nicotinate and nicotinamide metabolism cem00770   Pantothenate and CoA biosynthesis cem00780   Biotin metabolism cem00785   Lipoic acid metabolism cem00790   Folate biosynthesis cem00791   Atrazine degradation cem00860   Porphyrin metabolism cem00900   Terpenoid backbone biosynthesis cem00903   Limonene degradation cem00907   Pinene, camphor and geraniol degradation cem00910   Nitrogen metabolism cem00920   Sulfur metabolism cem00930   Caprolactam degradation cem00946   Degradation of flavonoids cem00997   Biosynthesis of various other secondary metabolites cem00999   Biosynthesis of various plant secondary metabolites cem01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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