KEGG   PATHWAY: cif01100
Entry
cif01100                    Pathway                                
Name
Metabolic pathways - Citrobacter sp. FDAARGOS_156
Class
Pathway map
cif01100  Metabolic pathways
cif01100

Module
cif_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cif01100]
cif_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cif01100]
cif_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cif01100]
cif_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cif01100]
cif_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cif01100]
cif_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cif01100]
cif_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cif01100]
cif_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:cif01100]
cif_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:cif01100]
cif_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cif01100]
cif_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cif01100]
cif_M00012  Glyoxylate cycle [PATH:cif01100]
cif_M00015  Proline biosynthesis, glutamate => proline [PATH:cif01100]
cif_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cif01100]
cif_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:cif01100]
cif_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cif01100]
cif_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cif01100]
cif_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:cif01100]
cif_M00021  Cysteine biosynthesis, serine => cysteine [PATH:cif01100]
cif_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cif01100]
cif_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:cif01100]
cif_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:cif01100]
cif_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:cif01100]
cif_M00026  Histidine biosynthesis, PRPP => histidine [PATH:cif01100]
cif_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:cif01100]
cif_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:cif01100]
cif_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cif01100]
cif_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cif01100]
cif_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cif01100]
cif_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:cif01100]
cif_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cif01100]
cif_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cif01100]
cif_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:cif01100]
cif_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cif01100]
cif_M00063  CMP-KDO biosynthesis [PATH:cif01100]
cif_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:cif01100]
cif_M00082  Fatty acid biosynthesis, initiation [PATH:cif01100]
cif_M00083  Fatty acid biosynthesis, elongation [PATH:cif01100]
cif_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:cif01100]
cif_M00087  beta-Oxidation [PATH:cif01100]
cif_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cif01100]
cif_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:cif01100]
cif_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cif01100]
cif_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:cif01100]
cif_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cif01100]
cif_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:cif01100]
cif_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cif01100]
cif_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:cif01100]
cif_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cif01100]
cif_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:cif01100]
cif_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cif01100]
cif_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:cif01100]
cif_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cif01100]
cif_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:cif01100]
cif_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:cif01100]
cif_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:cif01100]
cif_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:cif01100]
cif_M00149  Succinate dehydrogenase, prokaryotes [PATH:cif01100]
cif_M00150  Fumarate reductase, prokaryotes [PATH:cif01100]
cif_M00151  Cytochrome bc1 complex respiratory unit [PATH:cif01100]
cif_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:cif01100]
cif_M00168  CAM (Crassulacean acid metabolism), dark [PATH:cif01100]
cif_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:cif01100]
cif_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cif01100]
cif_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:cif01100]
cif_M00417  Cytochrome o ubiquinol oxidase [PATH:cif01100]
cif_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cif01100]
cif_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:cif01100]
cif_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:cif01100]
cif_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cif01100]
cif_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:cif01100]
cif_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cif01100]
cif_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cif01100]
cif_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:cif01100]
cif_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:cif01100]
cif_M00621  Glycine cleavage system [PATH:cif01100]
cif_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cif01100]
cif_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cif01100]
cif_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:cif01100]
cif_M00844  Arginine biosynthesis, ornithine => arginine [PATH:cif01100]
cif_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cif01100]
cif_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cif01100]
cif_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:cif01100]
cif_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:cif01100]
cif_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cif01100]
cif_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cif01100]
cif_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:cif01100]
cif_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cif01100]
cif_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:cif01100]
cif_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cif01100]
cif_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:cif01100]
cif_M00970  Proline degradation, proline => glutamate [PATH:cif01100]
Organism
Citrobacter sp. FDAARGOS_156 [GN:cif]
Related
pathway
cif00010  Glycolysis / Gluconeogenesis
cif00020  Citrate cycle (TCA cycle)
cif00030  Pentose phosphate pathway
cif00040  Pentose and glucuronate interconversions
cif00051  Fructose and mannose metabolism
cif00052  Galactose metabolism
cif00053  Ascorbate and aldarate metabolism
cif00061  Fatty acid biosynthesis
cif00071  Fatty acid degradation
cif00074  Mycolic acid biosynthesis
cif00130  Ubiquinone and other terpenoid-quinone biosynthesis
cif00190  Oxidative phosphorylation
cif00220  Arginine biosynthesis
cif00230  Purine metabolism
cif00240  Pyrimidine metabolism
cif00250  Alanine, aspartate and glutamate metabolism
cif00260  Glycine, serine and threonine metabolism
cif00261  Monobactam biosynthesis
cif00270  Cysteine and methionine metabolism
cif00280  Valine, leucine and isoleucine degradation
cif00290  Valine, leucine and isoleucine biosynthesis
cif00300  Lysine biosynthesis
cif00310  Lysine degradation
cif00330  Arginine and proline metabolism
cif00332  Carbapenem biosynthesis
cif00340  Histidine metabolism
cif00350  Tyrosine metabolism
cif00360  Phenylalanine metabolism
cif00361  Chlorocyclohexane and chlorobenzene degradation
cif00362  Benzoate degradation
cif00364  Fluorobenzoate degradation
cif00380  Tryptophan metabolism
cif00400  Phenylalanine, tyrosine and tryptophan biosynthesis
cif00401  Novobiocin biosynthesis
cif00410  beta-Alanine metabolism
cif00430  Taurine and hypotaurine metabolism
cif00440  Phosphonate and phosphinate metabolism
cif00450  Selenocompound metabolism
cif00460  Cyanoamino acid metabolism
cif00470  D-Amino acid metabolism
cif00480  Glutathione metabolism
cif00500  Starch and sucrose metabolism
cif00511  Other glycan degradation
cif00520  Amino sugar and nucleotide sugar metabolism
cif00521  Streptomycin biosynthesis
cif00523  Polyketide sugar unit biosynthesis
cif00525  Acarbose and validamycin biosynthesis
cif00540  Lipopolysaccharide biosynthesis
cif00541  O-Antigen nucleotide sugar biosynthesis
cif00542  O-Antigen repeat unit biosynthesis
cif00543  Exopolysaccharide biosynthesis
cif00550  Peptidoglycan biosynthesis
cif00552  Teichoic acid biosynthesis
cif00561  Glycerolipid metabolism
cif00562  Inositol phosphate metabolism
cif00564  Glycerophospholipid metabolism
cif00565  Ether lipid metabolism
cif00592  alpha-Linolenic acid metabolism
cif00600  Sphingolipid metabolism
cif00620  Pyruvate metabolism
cif00621  Dioxin degradation
cif00622  Xylene degradation
cif00623  Toluene degradation
cif00625  Chloroalkane and chloroalkene degradation
cif00626  Naphthalene degradation
cif00627  Aminobenzoate degradation
cif00630  Glyoxylate and dicarboxylate metabolism
cif00633  Nitrotoluene degradation
cif00640  Propanoate metabolism
cif00650  Butanoate metabolism
cif00660  C5-Branched dibasic acid metabolism
cif00670  One carbon pool by folate
cif00680  Methane metabolism
cif00710  Carbon fixation by Calvin cycle
cif00720  Other carbon fixation pathways
cif00730  Thiamine metabolism
cif00740  Riboflavin metabolism
cif00750  Vitamin B6 metabolism
cif00760  Nicotinate and nicotinamide metabolism
cif00770  Pantothenate and CoA biosynthesis
cif00780  Biotin metabolism
cif00785  Lipoic acid metabolism
cif00790  Folate biosynthesis
cif00860  Porphyrin metabolism
cif00900  Terpenoid backbone biosynthesis
cif00907  Pinene, camphor and geraniol degradation
cif00910  Nitrogen metabolism
cif00920  Sulfur metabolism
cif00930  Caprolactam degradation
cif00946  Degradation of flavonoids
cif00999  Biosynthesis of various plant secondary metabolites
cif01040  Biosynthesis of unsaturated fatty acids
cif01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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