PATHWAY: cim01100 Help Entry cim01100                    Pathway                                 Name Metabolic pathways - Coccidioides immitis Class BRITE hierarchy Pathway map cim01100   Metabolic pathways Module cim_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cim01100] cim_M00002   Glycolysis, core module involving three-carbon compounds [PATH:cim01100] cim_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cim01100] cim_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cim01100] cim_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:cim01100] cim_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cim01100] cim_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cim01100] cim_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:cim01100] cim_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cim01100] cim_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cim01100] cim_M00012   Glyoxylate cycle [PATH:cim01100] cim_M00013   Malonate semialdehyde pathway, propanoyl-CoA => acetyl-CoA [PATH:cim01100] cim_M00015   Proline biosynthesis, glutamate => proline [PATH:cim01100] cim_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:cim01100] cim_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cim01100] cim_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cim01100] cim_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:cim01100] cim_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cim01100] cim_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:cim01100] cim_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:cim01100] cim_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:cim01100] cim_M00026   Histidine biosynthesis, PRPP => histidine [PATH:cim01100] cim_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:cim01100] cim_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:cim01100] cim_M00030   Lysine biosynthesis, AAA pathway, 2-oxoglutarate => 2-aminoadipate => lysine [PATH:cim01100] cim_M00035   Methionine degradation [PATH:cim01100] cim_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:cim01100] cim_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:cim01100] cim_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cim01100] cim_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cim01100] cim_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cim01100] cim_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cim01100] cim_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cim01100] cim_M00055   N-glycan precursor biosynthesis [PATH:cim01100] cim_M00072   N-glycosylation by oligosaccharyltransferase [PATH:cim01100] cim_M00073   N-glycan precursor trimming [PATH:cim01100] cim_M00082   Fatty acid biosynthesis, initiation [PATH:cim01100] cim_M00083   Fatty acid biosynthesis, elongation [PATH:cim01100] cim_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:cim01100] cim_M00089   Triacylglycerol biosynthesis [PATH:cim01100] cim_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:cim01100] cim_M00092   Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:cim01100] cim_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cim01100] cim_M00094   Ceramide biosynthesis [PATH:cim01100] cim_M00095   C5 isoprenoid biosynthesis, mevalonate pathway [PATH:cim01100] cim_M00098   Acylglycerol degradation [PATH:cim01100] cim_M00099   Sphingosine biosynthesis [PATH:cim01100] cim_M00100   Sphingosine degradation [PATH:cim01100] cim_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:cim01100] cim_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cim01100] cim_M00128   Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:cim01100] cim_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:cim01100] cim_M00141   C1-unit interconversion, eukaryotes [PATH:cim01100] cim_M00143   NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:cim01100] cim_M00148   Succinate dehydrogenase (ubiquinone) [PATH:cim01100] cim_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:cim01100] cim_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cim01100] cim_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:cim01100] cim_M00367   C10-C20 isoprenoid biosynthesis, non-plant eukaryotes [PATH:cim01100] cim_M00415   Fatty acid elongation in endoplasmic reticulum [PATH:cim01100] cim_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cim01100] cim_M00433   Lysine biosynthesis, 2-oxoglutarate => 2-oxoadipate [PATH:cim01100] cim_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cim01100] cim_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cim01100] cim_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cim01100] cim_M00621   Glycine cleavage system [PATH:cim01100] cim_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cim01100] cim_M00844   Arginine biosynthesis, ornithine => arginine [PATH:cim01100] cim_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cim01100] cim_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:cim01100] cim_M00868   Heme biosynthesis, animals and fungi, glycine => heme [PATH:cim01100] cim_M00882   Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:cim01100] cim_M00892   UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:cim01100] cim_M00898   Thiamine biosynthesis, pyridoxal-5P => TMP/thiamine/TPP [PATH:cim01100] cim_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:cim01100] cim_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cim01100] cim_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:cim01100] cim_M00970   Proline degradation, proline => glutamate [PATH:cim01100] cim_M00972   Proline metabolism [PATH:cim01100] Organism Coccidioides immitis [GN:cim] Related pathway cim00010   Glycolysis / Gluconeogenesis cim00020   Citrate cycle (TCA cycle) cim00030   Pentose phosphate pathway cim00040   Pentose and glucuronate interconversions cim00051   Fructose and mannose metabolism cim00052   Galactose metabolism cim00053   Ascorbate and aldarate metabolism cim00061   Fatty acid biosynthesis cim00062   Fatty acid elongation cim00071   Fatty acid degradation cim00100   Steroid biosynthesis cim00130   Ubiquinone and other terpenoid-quinone biosynthesis cim00190   Oxidative phosphorylation cim00220   Arginine biosynthesis cim00230   Purine metabolism cim00232   Caffeine metabolism cim00240   Pyrimidine metabolism cim00250   Alanine, aspartate and glutamate metabolism cim00254   Aflatoxin biosynthesis cim00260   Glycine, serine and threonine metabolism cim00261   Monobactam biosynthesis cim00270   Cysteine and methionine metabolism cim00280   Valine, leucine and isoleucine degradation cim00290   Valine, leucine and isoleucine biosynthesis cim00300   Lysine biosynthesis cim00310   Lysine degradation cim00311   Penicillin and cephalosporin biosynthesis cim00330   Arginine and proline metabolism cim00332   Carbapenem biosynthesis cim00340   Histidine metabolism cim00350   Tyrosine metabolism cim00360   Phenylalanine metabolism cim00380   Tryptophan metabolism cim00400   Phenylalanine, tyrosine and tryptophan biosynthesis cim00404   Staurosporine biosynthesis cim00410   beta-Alanine metabolism cim00430   Taurine and hypotaurine metabolism cim00440   Phosphonate and phosphinate metabolism cim00450   Selenocompound metabolism cim00460   Cyanoamino acid metabolism cim00470   D-Amino acid metabolism cim00480   Glutathione metabolism cim00500   Starch and sucrose metabolism cim00510   N-Glycan biosynthesis cim00511   Other glycan degradation cim00513   Various types of N-glycan biosynthesis cim00514   Other types of O-glycan biosynthesis cim00515   Mannose type O-glycan biosynthesis cim00520   Amino sugar and nucleotide sugar metabolism cim00531   Glycosaminoglycan degradation cim00561   Glycerolipid metabolism cim00562   Inositol phosphate metabolism cim00563   Glycosylphosphatidylinositol (GPI)-anchor biosynthesis cim00564   Glycerophospholipid metabolism cim00565   Ether lipid metabolism cim00590   Arachidonic acid metabolism cim00591   Linoleic acid metabolism cim00592   alpha-Linolenic acid metabolism cim00600   Sphingolipid metabolism cim00604   Glycosphingolipid biosynthesis - ganglio series cim00620   Pyruvate metabolism cim00630   Glyoxylate and dicarboxylate metabolism cim00640   Propanoate metabolism cim00650   Butanoate metabolism cim00660   C5-Branched dibasic acid metabolism cim00670   One carbon pool by folate cim00680   Methane metabolism cim00730   Thiamine metabolism cim00740   Riboflavin metabolism cim00750   Vitamin B6 metabolism cim00760   Nicotinate and nicotinamide metabolism cim00770   Pantothenate and CoA biosynthesis cim00780   Biotin metabolism cim00785   Lipoic acid metabolism cim00790   Folate biosynthesis cim00791   Atrazine degradation cim00860   Porphyrin metabolism cim00900   Terpenoid backbone biosynthesis cim00904   Diterpenoid biosynthesis cim00906   Carotenoid biosynthesis cim00909   Sesquiterpenoid and triterpenoid biosynthesis cim00910   Nitrogen metabolism cim00920   Sulfur metabolism cim00999   Biosynthesis of various plant secondary metabolites cim01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system