KEGG   PATHWAY: cit01100
Entry
cit01100                    Pathway                                
Name
Metabolic pathways - Citrus sinensis (Valencia orange)
Class
Pathway map
cit01100  Metabolic pathways
cit01100

Module
cit_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cit01100]
cit_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cit01100]
cit_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cit01100]
cit_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cit01100]
cit_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cit01100]
cit_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cit01100]
cit_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cit01100]
cit_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cit01100]
cit_M00012  Glyoxylate cycle [PATH:cit01100]
cit_M00015  Proline biosynthesis, glutamate => proline [PATH:cit01100]
cit_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cit01100]
cit_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cit01100]
cit_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:cit01100]
cit_M00021  Cysteine biosynthesis, serine => cysteine [PATH:cit01100]
cit_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cit01100]
cit_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:cit01100]
cit_M00026  Histidine biosynthesis, PRPP => histidine [PATH:cit01100]
cit_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:cit01100]
cit_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:cit01100]
cit_M00034  Methionine salvage pathway [PATH:cit01100]
cit_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:cit01100]
cit_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:cit01100]
cit_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:cit01100]
cit_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:cit01100]
cit_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:cit01100]
cit_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cit01100]
cit_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cit01100]
cit_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cit01100]
cit_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cit01100]
cit_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cit01100]
cit_M00055  N-glycan precursor biosynthesis [PATH:cit01100]
cit_M00073  N-glycan precursor trimming [PATH:cit01100]
cit_M00081  Pectin degradation [PATH:cit01100]
cit_M00082  Fatty acid biosynthesis, initiation [PATH:cit01100]
cit_M00083  Fatty acid biosynthesis, elongation [PATH:cit01100]
cit_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:cit01100]
cit_M00087  beta-Oxidation [PATH:cit01100]
cit_M00089  Triacylglycerol biosynthesis [PATH:cit01100]
cit_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:cit01100]
cit_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:cit01100]
cit_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:cit01100]
cit_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:cit01100]
cit_M00098  Acylglycerol degradation [PATH:cit01100]
cit_M00100  Sphingosine degradation [PATH:cit01100]
cit_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:cit01100]
cit_M00113  Jasmonic acid biosynthesis [PATH:cit01100]
cit_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:cit01100]
cit_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cit01100]
cit_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:cit01100]
cit_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cit01100]
cit_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cit01100]
cit_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cit01100]
cit_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:cit01100]
cit_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:cit01100]
cit_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:cit01100]
cit_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:cit01100]
cit_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:cit01100]
cit_M00142  NADH:ubiquinone oxidoreductase, mitochondria [PATH:cit01100]
cit_M00143  NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:cit01100]
cit_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:cit01100]
cit_M00151  Cytochrome bc1 complex respiratory unit [PATH:cit01100]
cit_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:cit01100]
cit_M00161  Photosystem II [PATH:cit01100]
cit_M00163  Photosystem I [PATH:cit01100]
cit_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:cit01100]
cit_M00168  CAM (Crassulacean acid metabolism), dark [PATH:cit01100]
cit_M00169  CAM (Crassulacean acid metabolism), light [PATH:cit01100]
cit_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:cit01100]
cit_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:cit01100]
cit_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:cit01100]
cit_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:cit01100]
cit_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cit01100]
cit_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:cit01100]
cit_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:cit01100]
cit_M00371  Castasterone biosynthesis, campesterol => castasterone [PATH:cit01100]
cit_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:cit01100]
cit_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:cit01100]
cit_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cit01100]
cit_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:cit01100]
cit_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:cit01100]
cit_M00532  Photorespiration [PATH:cit01100]
cit_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cit01100]
cit_M00555  Betaine biosynthesis, choline => betaine [PATH:cit01100]
cit_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cit01100]
cit_M00621  Glycine cleavage system [PATH:cit01100]
cit_M00844  Arginine biosynthesis, ornithine => arginine [PATH:cit01100]
cit_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cit01100]
cit_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cit01100]
cit_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cit01100]
cit_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:cit01100]
cit_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:cit01100]
cit_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:cit01100]
cit_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:cit01100]
cit_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:cit01100]
cit_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:cit01100]
cit_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:cit01100]
cit_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:cit01100]
cit_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:cit01100]
cit_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:cit01100]
cit_M00936  Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:cit01100]
cit_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cit01100]
cit_M00970  Proline degradation, proline => glutamate [PATH:cit01100]
cit_M00972  Proline metabolism [PATH:cit01100]
Organism
Citrus sinensis (Valencia orange) [GN:cit]
Related
pathway
cit00010  Glycolysis / Gluconeogenesis
cit00020  Citrate cycle (TCA cycle)
cit00030  Pentose phosphate pathway
cit00040  Pentose and glucuronate interconversions
cit00051  Fructose and mannose metabolism
cit00052  Galactose metabolism
cit00053  Ascorbate and aldarate metabolism
cit00061  Fatty acid biosynthesis
cit00062  Fatty acid elongation
cit00071  Fatty acid degradation
cit00073  Cutin, suberine and wax biosynthesis
cit00100  Steroid biosynthesis
cit00130  Ubiquinone and other terpenoid-quinone biosynthesis
cit00190  Oxidative phosphorylation
cit00195  Photosynthesis
cit00196  Photosynthesis - antenna proteins
cit00220  Arginine biosynthesis
cit00230  Purine metabolism
cit00232  Caffeine metabolism
cit00240  Pyrimidine metabolism
cit00250  Alanine, aspartate and glutamate metabolism
cit00260  Glycine, serine and threonine metabolism
cit00261  Monobactam biosynthesis
cit00270  Cysteine and methionine metabolism
cit00280  Valine, leucine and isoleucine degradation
cit00290  Valine, leucine and isoleucine biosynthesis
cit00300  Lysine biosynthesis
cit00310  Lysine degradation
cit00330  Arginine and proline metabolism
cit00340  Histidine metabolism
cit00350  Tyrosine metabolism
cit00360  Phenylalanine metabolism
cit00380  Tryptophan metabolism
cit00400  Phenylalanine, tyrosine and tryptophan biosynthesis
cit00410  beta-Alanine metabolism
cit00430  Taurine and hypotaurine metabolism
cit00440  Phosphonate and phosphinate metabolism
cit00450  Selenocompound metabolism
cit00460  Cyanoamino acid metabolism
cit00470  D-Amino acid metabolism
cit00480  Glutathione metabolism
cit00500  Starch and sucrose metabolism
cit00510  N-Glycan biosynthesis
cit00511  Other glycan degradation
cit00513  Various types of N-glycan biosynthesis
cit00514  Other types of O-glycan biosynthesis
cit00520  Amino sugar and nucleotide sugar metabolism
cit00531  Glycosaminoglycan degradation
cit00543  Exopolysaccharide biosynthesis
cit00561  Glycerolipid metabolism
cit00562  Inositol phosphate metabolism
cit00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
cit00564  Glycerophospholipid metabolism
cit00565  Ether lipid metabolism
cit00590  Arachidonic acid metabolism
cit00591  Linoleic acid metabolism
cit00592  alpha-Linolenic acid metabolism
cit00600  Sphingolipid metabolism
cit00601  Glycosphingolipid biosynthesis - lacto and neolacto series
cit00603  Glycosphingolipid biosynthesis - globo and isoglobo series
cit00604  Glycosphingolipid biosynthesis - ganglio series
cit00620  Pyruvate metabolism
cit00630  Glyoxylate and dicarboxylate metabolism
cit00640  Propanoate metabolism
cit00650  Butanoate metabolism
cit00660  C5-Branched dibasic acid metabolism
cit00670  One carbon pool by folate
cit00710  Carbon fixation in photosynthetic organisms
cit00730  Thiamine metabolism
cit00740  Riboflavin metabolism
cit00750  Vitamin B6 metabolism
cit00760  Nicotinate and nicotinamide metabolism
cit00770  Pantothenate and CoA biosynthesis
cit00780  Biotin metabolism
cit00785  Lipoic acid metabolism
cit00790  Folate biosynthesis
cit00860  Porphyrin metabolism
cit00900  Terpenoid backbone biosynthesis
cit00902  Monoterpenoid biosynthesis
cit00904  Diterpenoid biosynthesis
cit00905  Brassinosteroid biosynthesis
cit00906  Carotenoid biosynthesis
cit00908  Zeatin biosynthesis
cit00909  Sesquiterpenoid and triterpenoid biosynthesis
cit00910  Nitrogen metabolism
cit00920  Sulfur metabolism
cit00940  Phenylpropanoid biosynthesis
cit00941  Flavonoid biosynthesis
cit00942  Anthocyanin biosynthesis
cit00943  Isoflavonoid biosynthesis
cit00944  Flavone and flavonol biosynthesis
cit00950  Isoquinoline alkaloid biosynthesis
cit00960  Tropane, piperidine and pyridine alkaloid biosynthesis
cit00965  Betalain biosynthesis
cit00966  Glucosinolate biosynthesis
cit00996  Biosynthesis of various alkaloids
cit00999  Biosynthesis of various plant secondary metabolites
cit01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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