PATHWAY: cli01100 Help Entry cli01100                    Pathway                                 Name Metabolic pathways - Chlorobium limicola Class BRITE hierarchy Pathway map cli01100   Metabolic pathways Module cli_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cli01100] cli_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cli01100] cli_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:cli01100] cli_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cli01100] cli_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cli01100] cli_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:cli01100] cli_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cli01100] cli_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cli01100] cli_M00015   Proline biosynthesis, glutamate => proline [PATH:cli01100] cli_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cli01100] cli_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cli01100] cli_M00021   Cysteine biosynthesis, serine => cysteine [PATH:cli01100] cli_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:cli01100] cli_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:cli01100] cli_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cli01100] cli_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cli01100] cli_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cli01100] cli_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cli01100] cli_M00063   CMP-KDO biosynthesis [PATH:cli01100] cli_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:cli01100] cli_M00082   Fatty acid biosynthesis, initiation [PATH:cli01100] cli_M00083   Fatty acid biosynthesis, elongation [PATH:cli01100] cli_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:cli01100] cli_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cli01100] cli_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cli01100] cli_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:cli01100] cli_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:cli01100] cli_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cli01100] cli_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cli01100] cli_M00168   CAM (Crassulacean acid metabolism), dark [PATH:cli01100] cli_M00173   Reductive citrate cycle (Arnon-Buchanan cycle) [PATH:cli01100] cli_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:cli01100] cli_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cli01100] cli_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:cli01100] cli_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cli01100] cli_M00621   Glycine cleavage system [PATH:cli01100] cli_M00793   dTDP-L-rhamnose biosynthesis [PATH:cli01100] cli_M00843   L-threo-Tetrahydrobiopterin biosynthesis, GTP => L-threo-BH4 [PATH:cli01100] cli_M00844   Arginine biosynthesis, ornithine => arginine [PATH:cli01100] Organism Chlorobium limicola [GN:cli] Related pathway cli00010   Glycolysis / Gluconeogenesis cli00020   Citrate cycle (TCA cycle) cli00030   Pentose phosphate pathway cli00040   Pentose and glucuronate interconversions cli00051   Fructose and mannose metabolism cli00052   Galactose metabolism cli00053   Ascorbate and aldarate metabolism cli00061   Fatty acid biosynthesis cli00071   Fatty acid degradation cli00130   Ubiquinone and other terpenoid-quinone biosynthesis cli00190   Oxidative phosphorylation cli00220   Arginine biosynthesis cli00230   Purine metabolism cli00240   Pyrimidine metabolism cli00250   Alanine, aspartate and glutamate metabolism cli00260   Glycine, serine and threonine metabolism cli00261   Monobactam biosynthesis cli00270   Cysteine and methionine metabolism cli00280   Valine, leucine and isoleucine degradation cli00290   Valine, leucine and isoleucine biosynthesis cli00300   Lysine biosynthesis cli00310   Lysine degradation cli00330   Arginine and proline metabolism cli00332   Carbapenem biosynthesis cli00340   Histidine metabolism cli00350   Tyrosine metabolism cli00360   Phenylalanine metabolism cli00362   Benzoate degradation cli00380   Tryptophan metabolism cli00400   Phenylalanine, tyrosine and tryptophan biosynthesis cli00401   Novobiocin biosynthesis cli00410   beta-Alanine metabolism cli00430   Taurine and hypotaurine metabolism cli00450   Selenocompound metabolism cli00460   Cyanoamino acid metabolism cli00470   D-Amino acid metabolism cli00480   Glutathione metabolism cli00500   Starch and sucrose metabolism cli00520   Amino sugar and nucleotide sugar metabolism cli00521   Streptomycin biosynthesis cli00523   Polyketide sugar unit biosynthesis cli00525   Acarbose and validamycin biosynthesis cli00540   Lipopolysaccharide biosynthesis cli00541   O-Antigen nucleotide sugar biosynthesis cli00542   O-Antigen repeat unit biosynthesis cli00543   Exopolysaccharide biosynthesis cli00550   Peptidoglycan biosynthesis cli00552   Teichoic acid biosynthesis cli00561   Glycerolipid metabolism cli00562   Inositol phosphate metabolism cli00564   Glycerophospholipid metabolism cli00620   Pyruvate metabolism cli00625   Chloroalkane and chloroalkene degradation cli00630   Glyoxylate and dicarboxylate metabolism cli00633   Nitrotoluene degradation cli00640   Propanoate metabolism cli00650   Butanoate metabolism cli00660   C5-Branched dibasic acid metabolism cli00670   One carbon pool by folate cli00680   Methane metabolism cli00710   Carbon fixation by Calvin cycle cli00720   Other carbon fixation pathways cli00730   Thiamine metabolism cli00740   Riboflavin metabolism cli00750   Vitamin B6 metabolism cli00760   Nicotinate and nicotinamide metabolism cli00770   Pantothenate and CoA biosynthesis cli00780   Biotin metabolism cli00785   Lipoic acid metabolism cli00790   Folate biosynthesis cli00860   Porphyrin metabolism cli00900   Terpenoid backbone biosynthesis cli00906   Carotenoid biosynthesis cli00910   Nitrogen metabolism cli00920   Sulfur metabolism KO pathway ko01100     LinkDB All DBs

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