KEGG   PATHWAY: cmc01100
Entry
cmc01100                    Pathway                                
Name
Metabolic pathways - Clavibacter nebraskensis
Class
Pathway map
cmc01100  Metabolic pathways
cmc01100

Module
cmc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cmc01100]
cmc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cmc01100]
cmc_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cmc01100]
cmc_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cmc01100]
cmc_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cmc01100]
cmc_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cmc01100]
cmc_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cmc01100]
cmc_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:cmc01100]
cmc_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cmc01100]
cmc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cmc01100]
cmc_M00015  Proline biosynthesis, glutamate => proline [PATH:cmc01100]
cmc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cmc01100]
cmc_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cmc01100]
cmc_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cmc01100]
cmc_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:cmc01100]
cmc_M00021  Cysteine biosynthesis, serine => cysteine [PATH:cmc01100]
cmc_M00026  Histidine biosynthesis, PRPP => histidine [PATH:cmc01100]
cmc_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:cmc01100]
cmc_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cmc01100]
cmc_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cmc01100]
cmc_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cmc01100]
cmc_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cmc01100]
cmc_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cmc01100]
cmc_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:cmc01100]
cmc_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:cmc01100]
cmc_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cmc01100]
cmc_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:cmc01100]
cmc_M00149  Succinate dehydrogenase, prokaryotes [PATH:cmc01100]
cmc_M00151  Cytochrome bc1 complex respiratory unit [PATH:cmc01100]
cmc_M00155  Cytochrome c oxidase, prokaryotes [PATH:cmc01100]
cmc_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:cmc01100]
cmc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cmc01100]
cmc_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:cmc01100]
cmc_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:cmc01100]
cmc_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cmc01100]
cmc_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cmc01100]
cmc_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cmc01100]
cmc_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cmc01100]
cmc_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:cmc01100]
cmc_M00621  Glycine cleavage system [PATH:cmc01100]
cmc_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cmc01100]
cmc_M00793  dTDP-L-rhamnose biosynthesis [PATH:cmc01100]
cmc_M00844  Arginine biosynthesis, ornithine => arginine [PATH:cmc01100]
cmc_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cmc01100]
cmc_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:cmc01100]
cmc_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cmc01100]
cmc_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:cmc01100]
cmc_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cmc01100]
cmc_M00970  Proline degradation, proline => glutamate [PATH:cmc01100]
cmc_M00972  Proline metabolism [PATH:cmc01100]
Organism
Clavibacter nebraskensis [GN:cmc]
Related
pathway
cmc00010  Glycolysis / Gluconeogenesis
cmc00020  Citrate cycle (TCA cycle)
cmc00030  Pentose phosphate pathway
cmc00040  Pentose and glucuronate interconversions
cmc00051  Fructose and mannose metabolism
cmc00052  Galactose metabolism
cmc00053  Ascorbate and aldarate metabolism
cmc00061  Fatty acid biosynthesis
cmc00071  Fatty acid degradation
cmc00130  Ubiquinone and other terpenoid-quinone biosynthesis
cmc00190  Oxidative phosphorylation
cmc00220  Arginine biosynthesis
cmc00230  Purine metabolism
cmc00240  Pyrimidine metabolism
cmc00250  Alanine, aspartate and glutamate metabolism
cmc00260  Glycine, serine and threonine metabolism
cmc00261  Monobactam biosynthesis
cmc00270  Cysteine and methionine metabolism
cmc00280  Valine, leucine and isoleucine degradation
cmc00290  Valine, leucine and isoleucine biosynthesis
cmc00300  Lysine biosynthesis
cmc00310  Lysine degradation
cmc00311  Penicillin and cephalosporin biosynthesis
cmc00330  Arginine and proline metabolism
cmc00332  Carbapenem biosynthesis
cmc00340  Histidine metabolism
cmc00350  Tyrosine metabolism
cmc00360  Phenylalanine metabolism
cmc00361  Chlorocyclohexane and chlorobenzene degradation
cmc00362  Benzoate degradation
cmc00364  Fluorobenzoate degradation
cmc00380  Tryptophan metabolism
cmc00400  Phenylalanine, tyrosine and tryptophan biosynthesis
cmc00401  Novobiocin biosynthesis
cmc00410  beta-Alanine metabolism
cmc00430  Taurine and hypotaurine metabolism
cmc00450  Selenocompound metabolism
cmc00460  Cyanoamino acid metabolism
cmc00470  D-Amino acid metabolism
cmc00480  Glutathione metabolism
cmc00500  Starch and sucrose metabolism
cmc00511  Other glycan degradation
cmc00514  Other types of O-glycan biosynthesis
cmc00515  Mannose type O-glycan biosynthesis
cmc00520  Amino sugar and nucleotide sugar metabolism
cmc00521  Streptomycin biosynthesis
cmc00523  Polyketide sugar unit biosynthesis
cmc00525  Acarbose and validamycin biosynthesis
cmc00540  Lipopolysaccharide biosynthesis
cmc00541  O-Antigen nucleotide sugar biosynthesis
cmc00542  O-Antigen repeat unit biosynthesis
cmc00543  Exopolysaccharide biosynthesis
cmc00550  Peptidoglycan biosynthesis
cmc00552  Teichoic acid biosynthesis
cmc00561  Glycerolipid metabolism
cmc00562  Inositol phosphate metabolism
cmc00564  Glycerophospholipid metabolism
cmc00592  alpha-Linolenic acid metabolism
cmc00600  Sphingolipid metabolism
cmc00620  Pyruvate metabolism
cmc00622  Xylene degradation
cmc00623  Toluene degradation
cmc00625  Chloroalkane and chloroalkene degradation
cmc00630  Glyoxylate and dicarboxylate metabolism
cmc00633  Nitrotoluene degradation
cmc00640  Propanoate metabolism
cmc00643  Styrene degradation
cmc00650  Butanoate metabolism
cmc00660  C5-Branched dibasic acid metabolism
cmc00670  One carbon pool by folate
cmc00680  Methane metabolism
cmc00710  Carbon fixation by Calvin cycle
cmc00720  Other carbon fixation pathways
cmc00730  Thiamine metabolism
cmc00740  Riboflavin metabolism
cmc00750  Vitamin B6 metabolism
cmc00760  Nicotinate and nicotinamide metabolism
cmc00770  Pantothenate and CoA biosynthesis
cmc00780  Biotin metabolism
cmc00785  Lipoic acid metabolism
cmc00790  Folate biosynthesis
cmc00791  Atrazine degradation
cmc00860  Porphyrin metabolism
cmc00900  Terpenoid backbone biosynthesis
cmc00907  Pinene, camphor and geraniol degradation
cmc00910  Nitrogen metabolism
cmc00920  Sulfur metabolism
cmc00946  Degradation of flavonoids
cmc00999  Biosynthesis of various plant secondary metabolites
cmc01040  Biosynthesis of unsaturated fatty acids
cmc01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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