KEGG   PATHWAY: cmed01100
Entry
cmed01100                   Pathway                                
Name
Metabolic pathways - Caminibacter mediatlanticus
Class
Pathway map
cmed01100  Metabolic pathways
cmed01100

Module
cmed_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cmed01100]
cmed_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cmed01100]
cmed_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cmed01100]
cmed_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cmed01100]
cmed_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cmed01100]
cmed_M00015  Proline biosynthesis, glutamate => proline [PATH:cmed01100]
cmed_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cmed01100]
cmed_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cmed01100]
cmed_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cmed01100]
cmed_M00021  Cysteine biosynthesis, serine => cysteine [PATH:cmed01100]
cmed_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cmed01100]
cmed_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:cmed01100]
cmed_M00026  Histidine biosynthesis, PRPP => histidine [PATH:cmed01100]
cmed_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:cmed01100]
cmed_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cmed01100]
cmed_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cmed01100]
cmed_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cmed01100]
cmed_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cmed01100]
cmed_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cmed01100]
cmed_M00063  CMP-KDO biosynthesis [PATH:cmed01100]
cmed_M00082  Fatty acid biosynthesis, initiation [PATH:cmed01100]
cmed_M00083  Fatty acid biosynthesis, elongation [PATH:cmed01100]
cmed_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:cmed01100]
cmed_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cmed01100]
cmed_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cmed01100]
cmed_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cmed01100]
cmed_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:cmed01100]
cmed_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cmed01100]
cmed_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cmed01100]
cmed_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cmed01100]
cmed_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:cmed01100]
cmed_M00173  Reductive citrate cycle (Arnon-Buchanan cycle) [PATH:cmed01100]
cmed_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cmed01100]
cmed_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cmed01100]
cmed_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:cmed01100]
cmed_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cmed01100]
cmed_M00793  dTDP-L-rhamnose biosynthesis [PATH:cmed01100]
cmed_M00844  Arginine biosynthesis, ornithine => arginine [PATH:cmed01100]
cmed_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cmed01100]
cmed_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cmed01100]
cmed_M00931  Menaquinone biosynthesis, modified futalosine pathway [PATH:cmed01100]
Organism
Caminibacter mediatlanticus [GN:cmed]
Related
pathway
cmed00010  Glycolysis / Gluconeogenesis
cmed00020  Citrate cycle (TCA cycle)
cmed00030  Pentose phosphate pathway
cmed00040  Pentose and glucuronate interconversions
cmed00051  Fructose and mannose metabolism
cmed00052  Galactose metabolism
cmed00053  Ascorbate and aldarate metabolism
cmed00061  Fatty acid biosynthesis
cmed00121  Secondary bile acid biosynthesis
cmed00130  Ubiquinone and other terpenoid-quinone biosynthesis
cmed00190  Oxidative phosphorylation
cmed00220  Arginine biosynthesis
cmed00230  Purine metabolism
cmed00240  Pyrimidine metabolism
cmed00250  Alanine, aspartate and glutamate metabolism
cmed00260  Glycine, serine and threonine metabolism
cmed00261  Monobactam biosynthesis
cmed00270  Cysteine and methionine metabolism
cmed00280  Valine, leucine and isoleucine degradation
cmed00290  Valine, leucine and isoleucine biosynthesis
cmed00300  Lysine biosynthesis
cmed00330  Arginine and proline metabolism
cmed00332  Carbapenem biosynthesis
cmed00340  Histidine metabolism
cmed00350  Tyrosine metabolism
cmed00360  Phenylalanine metabolism
cmed00400  Phenylalanine, tyrosine and tryptophan biosynthesis
cmed00401  Novobiocin biosynthesis
cmed00410  beta-Alanine metabolism
cmed00450  Selenocompound metabolism
cmed00470  D-Amino acid metabolism
cmed00480  Glutathione metabolism
cmed00500  Starch and sucrose metabolism
cmed00520  Amino sugar and nucleotide sugar metabolism
cmed00521  Streptomycin biosynthesis
cmed00523  Polyketide sugar unit biosynthesis
cmed00525  Acarbose and validamycin biosynthesis
cmed00540  Lipopolysaccharide biosynthesis
cmed00541  O-Antigen nucleotide sugar biosynthesis
cmed00543  Exopolysaccharide biosynthesis
cmed00550  Peptidoglycan biosynthesis
cmed00552  Teichoic acid biosynthesis
cmed00561  Glycerolipid metabolism
cmed00562  Inositol phosphate metabolism
cmed00564  Glycerophospholipid metabolism
cmed00620  Pyruvate metabolism
cmed00627  Aminobenzoate degradation
cmed00630  Glyoxylate and dicarboxylate metabolism
cmed00633  Nitrotoluene degradation
cmed00640  Propanoate metabolism
cmed00650  Butanoate metabolism
cmed00660  C5-Branched dibasic acid metabolism
cmed00670  One carbon pool by folate
cmed00680  Methane metabolism
cmed00710  Carbon fixation by Calvin cycle
cmed00720  Other carbon fixation pathways
cmed00730  Thiamine metabolism
cmed00740  Riboflavin metabolism
cmed00750  Vitamin B6 metabolism
cmed00760  Nicotinate and nicotinamide metabolism
cmed00770  Pantothenate and CoA biosynthesis
cmed00780  Biotin metabolism
cmed00790  Folate biosynthesis
cmed00860  Porphyrin metabolism
cmed00900  Terpenoid backbone biosynthesis
cmed00910  Nitrogen metabolism
cmed00920  Sulfur metabolism
cmed00999  Biosynthesis of various plant secondary metabolites
KO pathway
ko01100   
LinkDB

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