KEGG   PATHWAY: cmi01100
Entry
cmi01100                    Pathway                                
Name
Metabolic pathways - Clavibacter michiganensis subsp. michiganensis
Class
Pathway map
cmi01100  Metabolic pathways
cmi01100

Module
cmi_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cmi01100]
cmi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cmi01100]
cmi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cmi01100]
cmi_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cmi01100]
cmi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cmi01100]
cmi_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cmi01100]
cmi_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cmi01100]
cmi_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:cmi01100]
cmi_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cmi01100]
cmi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cmi01100]
cmi_M00015  Proline biosynthesis, glutamate => proline [PATH:cmi01100]
cmi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cmi01100]
cmi_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:cmi01100]
cmi_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cmi01100]
cmi_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cmi01100]
cmi_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:cmi01100]
cmi_M00021  Cysteine biosynthesis, serine => cysteine [PATH:cmi01100]
cmi_M00026  Histidine biosynthesis, PRPP => histidine [PATH:cmi01100]
cmi_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:cmi01100]
cmi_M00035  Methionine degradation [PATH:cmi01100]
cmi_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cmi01100]
cmi_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cmi01100]
cmi_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cmi01100]
cmi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cmi01100]
cmi_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:cmi01100]
cmi_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:cmi01100]
cmi_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cmi01100]
cmi_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:cmi01100]
cmi_M00149  Succinate dehydrogenase, prokaryotes [PATH:cmi01100]
cmi_M00151  Cytochrome bc1 complex respiratory unit [PATH:cmi01100]
cmi_M00155  Cytochrome c oxidase, prokaryotes [PATH:cmi01100]
cmi_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:cmi01100]
cmi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cmi01100]
cmi_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:cmi01100]
cmi_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:cmi01100]
cmi_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cmi01100]
cmi_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cmi01100]
cmi_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cmi01100]
cmi_M00555  Betaine biosynthesis, choline => betaine [PATH:cmi01100]
cmi_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cmi01100]
cmi_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:cmi01100]
cmi_M00621  Glycine cleavage system [PATH:cmi01100]
cmi_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cmi01100]
cmi_M00793  dTDP-L-rhamnose biosynthesis [PATH:cmi01100]
cmi_M00844  Arginine biosynthesis, ornithine => arginine [PATH:cmi01100]
cmi_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cmi01100]
cmi_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:cmi01100]
cmi_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cmi01100]
cmi_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:cmi01100]
cmi_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cmi01100]
cmi_M00970  Proline degradation, proline => glutamate [PATH:cmi01100]
Organism
Clavibacter michiganensis subsp. michiganensis [GN:cmi]
Related
pathway
cmi00010  Glycolysis / Gluconeogenesis
cmi00020  Citrate cycle (TCA cycle)
cmi00030  Pentose phosphate pathway
cmi00040  Pentose and glucuronate interconversions
cmi00051  Fructose and mannose metabolism
cmi00052  Galactose metabolism
cmi00053  Ascorbate and aldarate metabolism
cmi00061  Fatty acid biosynthesis
cmi00062  Fatty acid elongation
cmi00071  Fatty acid degradation
cmi00130  Ubiquinone and other terpenoid-quinone biosynthesis
cmi00190  Oxidative phosphorylation
cmi00220  Arginine biosynthesis
cmi00230  Purine metabolism
cmi00240  Pyrimidine metabolism
cmi00250  Alanine, aspartate and glutamate metabolism
cmi00260  Glycine, serine and threonine metabolism
cmi00261  Monobactam biosynthesis
cmi00270  Cysteine and methionine metabolism
cmi00280  Valine, leucine and isoleucine degradation
cmi00290  Valine, leucine and isoleucine biosynthesis
cmi00300  Lysine biosynthesis
cmi00310  Lysine degradation
cmi00311  Penicillin and cephalosporin biosynthesis
cmi00330  Arginine and proline metabolism
cmi00332  Carbapenem biosynthesis
cmi00340  Histidine metabolism
cmi00350  Tyrosine metabolism
cmi00360  Phenylalanine metabolism
cmi00361  Chlorocyclohexane and chlorobenzene degradation
cmi00362  Benzoate degradation
cmi00364  Fluorobenzoate degradation
cmi00380  Tryptophan metabolism
cmi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
cmi00401  Novobiocin biosynthesis
cmi00410  beta-Alanine metabolism
cmi00430  Taurine and hypotaurine metabolism
cmi00440  Phosphonate and phosphinate metabolism
cmi00450  Selenocompound metabolism
cmi00460  Cyanoamino acid metabolism
cmi00470  D-Amino acid metabolism
cmi00480  Glutathione metabolism
cmi00500  Starch and sucrose metabolism
cmi00511  Other glycan degradation
cmi00514  Other types of O-glycan biosynthesis
cmi00515  Mannose type O-glycan biosynthesis
cmi00520  Amino sugar and nucleotide sugar metabolism
cmi00521  Streptomycin biosynthesis
cmi00523  Polyketide sugar unit biosynthesis
cmi00525  Acarbose and validamycin biosynthesis
cmi00540  Lipopolysaccharide biosynthesis
cmi00541  O-Antigen nucleotide sugar biosynthesis
cmi00542  O-Antigen repeat unit biosynthesis
cmi00543  Exopolysaccharide biosynthesis
cmi00550  Peptidoglycan biosynthesis
cmi00552  Teichoic acid biosynthesis
cmi00561  Glycerolipid metabolism
cmi00562  Inositol phosphate metabolism
cmi00564  Glycerophospholipid metabolism
cmi00592  alpha-Linolenic acid metabolism
cmi00600  Sphingolipid metabolism
cmi00620  Pyruvate metabolism
cmi00622  Xylene degradation
cmi00623  Toluene degradation
cmi00625  Chloroalkane and chloroalkene degradation
cmi00626  Naphthalene degradation
cmi00630  Glyoxylate and dicarboxylate metabolism
cmi00633  Nitrotoluene degradation
cmi00640  Propanoate metabolism
cmi00643  Styrene degradation
cmi00650  Butanoate metabolism
cmi00660  C5-Branched dibasic acid metabolism
cmi00670  One carbon pool by folate
cmi00680  Methane metabolism
cmi00710  Carbon fixation by Calvin cycle
cmi00720  Other carbon fixation pathways
cmi00730  Thiamine metabolism
cmi00740  Riboflavin metabolism
cmi00750  Vitamin B6 metabolism
cmi00760  Nicotinate and nicotinamide metabolism
cmi00770  Pantothenate and CoA biosynthesis
cmi00780  Biotin metabolism
cmi00785  Lipoic acid metabolism
cmi00790  Folate biosynthesis
cmi00791  Atrazine degradation
cmi00860  Porphyrin metabolism
cmi00900  Terpenoid backbone biosynthesis
cmi00907  Pinene, camphor and geraniol degradation
cmi00910  Nitrogen metabolism
cmi00920  Sulfur metabolism
cmi00930  Caprolactam degradation
cmi00946  Degradation of flavonoids
cmi00999  Biosynthesis of various plant secondary metabolites
cmi01040  Biosynthesis of unsaturated fatty acids
cmi01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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