KEGG   PATHWAY: cmr01100
Entry
cmr01100                    Pathway                                
Name
Metabolic pathways - Cyclobacterium marinum
Class
Pathway map
cmr01100  Metabolic pathways
cmr01100

Module
cmr_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cmr01100]
cmr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cmr01100]
cmr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cmr01100]
cmr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cmr01100]
cmr_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cmr01100]
cmr_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:cmr01100]
cmr_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cmr01100]
cmr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cmr01100]
cmr_M00015  Proline biosynthesis, glutamate => proline [PATH:cmr01100]
cmr_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:cmr01100]
cmr_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cmr01100]
cmr_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cmr01100]
cmr_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:cmr01100]
cmr_M00026  Histidine biosynthesis, PRPP => histidine [PATH:cmr01100]
cmr_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:cmr01100]
cmr_M00035  Methionine degradation [PATH:cmr01100]
cmr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cmr01100]
cmr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cmr01100]
cmr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cmr01100]
cmr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cmr01100]
cmr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cmr01100]
cmr_M00063  CMP-KDO biosynthesis [PATH:cmr01100]
cmr_M00082  Fatty acid biosynthesis, initiation [PATH:cmr01100]
cmr_M00083  Fatty acid biosynthesis, elongation [PATH:cmr01100]
cmr_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:cmr01100]
cmr_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cmr01100]
cmr_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cmr01100]
cmr_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:cmr01100]
cmr_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cmr01100]
cmr_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:cmr01100]
cmr_M00155  Cytochrome c oxidase, prokaryotes [PATH:cmr01100]
cmr_M00156  Cytochrome c oxidase, cbb3-type [PATH:cmr01100]
cmr_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:cmr01100]
cmr_M00168  CAM (Crassulacean acid metabolism), dark [PATH:cmr01100]
cmr_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:cmr01100]
cmr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cmr01100]
cmr_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cmr01100]
cmr_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:cmr01100]
cmr_M00535  Isoleucine biosynthesis, pyruvate => 2-oxobutanoate [PATH:cmr01100]
cmr_M00555  Betaine biosynthesis, choline => betaine [PATH:cmr01100]
cmr_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cmr01100]
cmr_M00621  Glycine cleavage system [PATH:cmr01100]
cmr_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cmr01100]
cmr_M00793  dTDP-L-rhamnose biosynthesis [PATH:cmr01100]
cmr_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cmr01100]
cmr_M00970  Proline degradation, proline => glutamate [PATH:cmr01100]
cmr_M00972  Proline metabolism [PATH:cmr01100]
Organism
Cyclobacterium marinum [GN:cmr]
Related
pathway
cmr00010  Glycolysis / Gluconeogenesis
cmr00020  Citrate cycle (TCA cycle)
cmr00030  Pentose phosphate pathway
cmr00040  Pentose and glucuronate interconversions
cmr00051  Fructose and mannose metabolism
cmr00052  Galactose metabolism
cmr00053  Ascorbate and aldarate metabolism
cmr00061  Fatty acid biosynthesis
cmr00071  Fatty acid degradation
cmr00074  Mycolic acid biosynthesis
cmr00100  Steroid biosynthesis
cmr00130  Ubiquinone and other terpenoid-quinone biosynthesis
cmr00190  Oxidative phosphorylation
cmr00220  Arginine biosynthesis
cmr00230  Purine metabolism
cmr00240  Pyrimidine metabolism
cmr00250  Alanine, aspartate and glutamate metabolism
cmr00260  Glycine, serine and threonine metabolism
cmr00261  Monobactam biosynthesis
cmr00270  Cysteine and methionine metabolism
cmr00280  Valine, leucine and isoleucine degradation
cmr00290  Valine, leucine and isoleucine biosynthesis
cmr00300  Lysine biosynthesis
cmr00310  Lysine degradation
cmr00311  Penicillin and cephalosporin biosynthesis
cmr00330  Arginine and proline metabolism
cmr00332  Carbapenem biosynthesis
cmr00340  Histidine metabolism
cmr00350  Tyrosine metabolism
cmr00360  Phenylalanine metabolism
cmr00361  Chlorocyclohexane and chlorobenzene degradation
cmr00362  Benzoate degradation
cmr00364  Fluorobenzoate degradation
cmr00380  Tryptophan metabolism
cmr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
cmr00401  Novobiocin biosynthesis
cmr00410  beta-Alanine metabolism
cmr00430  Taurine and hypotaurine metabolism
cmr00440  Phosphonate and phosphinate metabolism
cmr00450  Selenocompound metabolism
cmr00460  Cyanoamino acid metabolism
cmr00470  D-Amino acid metabolism
cmr00480  Glutathione metabolism
cmr00500  Starch and sucrose metabolism
cmr00511  Other glycan degradation
cmr00520  Amino sugar and nucleotide sugar metabolism
cmr00521  Streptomycin biosynthesis
cmr00523  Polyketide sugar unit biosynthesis
cmr00525  Acarbose and validamycin biosynthesis
cmr00540  Lipopolysaccharide biosynthesis
cmr00541  O-Antigen nucleotide sugar biosynthesis
cmr00542  O-Antigen repeat unit biosynthesis
cmr00543  Exopolysaccharide biosynthesis
cmr00550  Peptidoglycan biosynthesis
cmr00552  Teichoic acid biosynthesis
cmr00561  Glycerolipid metabolism
cmr00562  Inositol phosphate metabolism
cmr00564  Glycerophospholipid metabolism
cmr00565  Ether lipid metabolism
cmr00591  Linoleic acid metabolism
cmr00592  alpha-Linolenic acid metabolism
cmr00600  Sphingolipid metabolism
cmr00620  Pyruvate metabolism
cmr00623  Toluene degradation
cmr00625  Chloroalkane and chloroalkene degradation
cmr00626  Naphthalene degradation
cmr00630  Glyoxylate and dicarboxylate metabolism
cmr00633  Nitrotoluene degradation
cmr00640  Propanoate metabolism
cmr00650  Butanoate metabolism
cmr00660  C5-Branched dibasic acid metabolism
cmr00670  One carbon pool by folate
cmr00680  Methane metabolism
cmr00710  Carbon fixation by Calvin cycle
cmr00720  Other carbon fixation pathways
cmr00730  Thiamine metabolism
cmr00740  Riboflavin metabolism
cmr00750  Vitamin B6 metabolism
cmr00760  Nicotinate and nicotinamide metabolism
cmr00770  Pantothenate and CoA biosynthesis
cmr00780  Biotin metabolism
cmr00785  Lipoic acid metabolism
cmr00790  Folate biosynthesis
cmr00860  Porphyrin metabolism
cmr00900  Terpenoid backbone biosynthesis
cmr00906  Carotenoid biosynthesis
cmr00907  Pinene, camphor and geraniol degradation
cmr00910  Nitrogen metabolism
cmr00920  Sulfur metabolism
cmr00930  Caprolactam degradation
cmr00946  Degradation of flavonoids
cmr00997  Biosynthesis of various other secondary metabolites
cmr00998  Biosynthesis of various antibiotics
cmr01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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