PATHWAY: cobb01100 Help Entry cobb01100                   Pathway                                 Name Metabolic pathways - Cobetia sp. 4B Class BRITE hierarchy Pathway map cobb01100   Metabolic pathways Module cobb_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cobb01100] cobb_M00002   Glycolysis, core module involving three-carbon compounds [PATH:cobb01100] cobb_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cobb01100] cobb_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:cobb01100] cobb_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cobb01100] cobb_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cobb01100] cobb_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:cobb01100] cobb_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:cobb01100] cobb_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cobb01100] cobb_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cobb01100] cobb_M00015   Proline biosynthesis, glutamate => proline [PATH:cobb01100] cobb_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cobb01100] cobb_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cobb01100] cobb_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cobb01100] cobb_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:cobb01100] cobb_M00021   Cysteine biosynthesis, serine => cysteine [PATH:cobb01100] cobb_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cobb01100] cobb_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:cobb01100] cobb_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:cobb01100] cobb_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:cobb01100] cobb_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:cobb01100] cobb_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cobb01100] cobb_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cobb01100] cobb_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cobb01100] cobb_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cobb01100] cobb_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cobb01100] cobb_M00063   CMP-KDO biosynthesis [PATH:cobb01100] cobb_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:cobb01100] cobb_M00082   Fatty acid biosynthesis, initiation [PATH:cobb01100] cobb_M00083   Fatty acid biosynthesis, elongation [PATH:cobb01100] cobb_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:cobb01100] cobb_M00087   beta-Oxidation [PATH:cobb01100] cobb_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:cobb01100] cobb_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cobb01100] cobb_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cobb01100] cobb_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cobb01100] cobb_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:cobb01100] cobb_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cobb01100] cobb_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:cobb01100] cobb_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cobb01100] cobb_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cobb01100] cobb_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:cobb01100] cobb_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cobb01100] cobb_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:cobb01100] cobb_M00149   Succinate dehydrogenase, prokaryotes [PATH:cobb01100] cobb_M00151   Cytochrome bc1 complex respiratory unit [PATH:cobb01100] cobb_M00155   Cytochrome c oxidase, prokaryotes [PATH:cobb01100] cobb_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:cobb01100] cobb_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cobb01100] cobb_M00417   Cytochrome o ubiquinol oxidase [PATH:cobb01100] cobb_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cobb01100] cobb_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cobb01100] cobb_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:cobb01100] cobb_M00555   Betaine biosynthesis, choline => betaine [PATH:cobb01100] cobb_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cobb01100] cobb_M00621   Glycine cleavage system [PATH:cobb01100] cobb_M00844   Arginine biosynthesis, ornithine => arginine [PATH:cobb01100] cobb_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cobb01100] cobb_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:cobb01100] cobb_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cobb01100] cobb_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cobb01100] cobb_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:cobb01100] cobb_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cobb01100] cobb_M00919   Ectoine degradation, ectoine => aspartate [PATH:cobb01100] cobb_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cobb01100] cobb_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:cobb01100] cobb_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:cobb01100] cobb_M00970   Proline degradation, proline => glutamate [PATH:cobb01100] cobb_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:cobb01100] Organism Cobetia sp. 4B [GN:cobb] Related pathway cobb00010   Glycolysis / Gluconeogenesis cobb00020   Citrate cycle (TCA cycle) cobb00030   Pentose phosphate pathway cobb00040   Pentose and glucuronate interconversions cobb00051   Fructose and mannose metabolism cobb00052   Galactose metabolism cobb00053   Ascorbate and aldarate metabolism cobb00061   Fatty acid biosynthesis cobb00071   Fatty acid degradation cobb00130   Ubiquinone and other terpenoid-quinone biosynthesis cobb00190   Oxidative phosphorylation cobb00220   Arginine biosynthesis cobb00230   Purine metabolism cobb00240   Pyrimidine metabolism cobb00250   Alanine, aspartate and glutamate metabolism cobb00260   Glycine, serine and threonine metabolism cobb00261   Monobactam biosynthesis cobb00270   Cysteine and methionine metabolism cobb00280   Valine, leucine and isoleucine degradation cobb00290   Valine, leucine and isoleucine biosynthesis cobb00300   Lysine biosynthesis cobb00310   Lysine degradation cobb00330   Arginine and proline metabolism cobb00332   Carbapenem biosynthesis cobb00340   Histidine metabolism cobb00350   Tyrosine metabolism cobb00360   Phenylalanine metabolism cobb00362   Benzoate degradation cobb00380   Tryptophan metabolism cobb00400   Phenylalanine, tyrosine and tryptophan biosynthesis cobb00401   Novobiocin biosynthesis cobb00410   beta-Alanine metabolism cobb00430   Taurine and hypotaurine metabolism cobb00440   Phosphonate and phosphinate metabolism cobb00450   Selenocompound metabolism cobb00460   Cyanoamino acid metabolism cobb00470   D-Amino acid metabolism cobb00480   Glutathione metabolism cobb00500   Starch and sucrose metabolism cobb00520   Amino sugar and nucleotide sugar metabolism cobb00521   Streptomycin biosynthesis cobb00523   Polyketide sugar unit biosynthesis cobb00525   Acarbose and validamycin biosynthesis cobb00540   Lipopolysaccharide biosynthesis cobb00541   O-Antigen nucleotide sugar biosynthesis cobb00543   Exopolysaccharide biosynthesis cobb00550   Peptidoglycan biosynthesis cobb00552   Teichoic acid biosynthesis cobb00561   Glycerolipid metabolism cobb00562   Inositol phosphate metabolism cobb00564   Glycerophospholipid metabolism cobb00565   Ether lipid metabolism cobb00592   alpha-Linolenic acid metabolism cobb00600   Sphingolipid metabolism cobb00620   Pyruvate metabolism cobb00622   Xylene degradation cobb00623   Toluene degradation cobb00625   Chloroalkane and chloroalkene degradation cobb00626   Naphthalene degradation cobb00627   Aminobenzoate degradation cobb00630   Glyoxylate and dicarboxylate metabolism cobb00633   Nitrotoluene degradation cobb00640   Propanoate metabolism cobb00643   Styrene degradation cobb00650   Butanoate metabolism cobb00660   C5-Branched dibasic acid metabolism cobb00670   One carbon pool by folate cobb00680   Methane metabolism cobb00730   Thiamine metabolism cobb00740   Riboflavin metabolism cobb00750   Vitamin B6 metabolism cobb00760   Nicotinate and nicotinamide metabolism cobb00770   Pantothenate and CoA biosynthesis cobb00780   Biotin metabolism cobb00785   Lipoic acid metabolism cobb00790   Folate biosynthesis cobb00791   Atrazine degradation cobb00860   Porphyrin metabolism cobb00900   Terpenoid backbone biosynthesis cobb00903   Limonene degradation cobb00907   Pinene, camphor and geraniol degradation cobb00910   Nitrogen metabolism cobb00920   Sulfur metabolism cobb00930   Caprolactam degradation cobb00999   Biosynthesis of various plant secondary metabolites cobb01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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