PATHWAY: cobe01100 Help Entry cobe01100                   Pathway                                 Name Metabolic pathways - Cobetia sp. AM6 Class BRITE hierarchy Pathway map cobe01100   Metabolic pathways Module cobe_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cobe01100] cobe_M00002   Glycolysis, core module involving three-carbon compounds [PATH:cobe01100] cobe_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cobe01100] cobe_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:cobe01100] cobe_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cobe01100] cobe_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cobe01100] cobe_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:cobe01100] cobe_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:cobe01100] cobe_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cobe01100] cobe_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cobe01100] cobe_M00015   Proline biosynthesis, glutamate => proline [PATH:cobe01100] cobe_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cobe01100] cobe_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cobe01100] cobe_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cobe01100] cobe_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:cobe01100] cobe_M00021   Cysteine biosynthesis, serine => cysteine [PATH:cobe01100] cobe_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cobe01100] cobe_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:cobe01100] cobe_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:cobe01100] cobe_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:cobe01100] cobe_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:cobe01100] cobe_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cobe01100] cobe_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cobe01100] cobe_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cobe01100] cobe_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cobe01100] cobe_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cobe01100] cobe_M00063   CMP-KDO biosynthesis [PATH:cobe01100] cobe_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:cobe01100] cobe_M00082   Fatty acid biosynthesis, initiation [PATH:cobe01100] cobe_M00083   Fatty acid biosynthesis, elongation [PATH:cobe01100] cobe_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:cobe01100] cobe_M00087   beta-Oxidation [PATH:cobe01100] cobe_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:cobe01100] cobe_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cobe01100] cobe_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cobe01100] cobe_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cobe01100] cobe_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:cobe01100] cobe_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cobe01100] cobe_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:cobe01100] cobe_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cobe01100] cobe_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cobe01100] cobe_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:cobe01100] cobe_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cobe01100] cobe_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:cobe01100] cobe_M00149   Succinate dehydrogenase, prokaryotes [PATH:cobe01100] cobe_M00151   Cytochrome bc1 complex respiratory unit [PATH:cobe01100] cobe_M00155   Cytochrome c oxidase, prokaryotes [PATH:cobe01100] cobe_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:cobe01100] cobe_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cobe01100] cobe_M00417   Cytochrome o ubiquinol oxidase [PATH:cobe01100] cobe_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cobe01100] cobe_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cobe01100] cobe_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:cobe01100] cobe_M00555   Betaine biosynthesis, choline => betaine [PATH:cobe01100] cobe_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cobe01100] cobe_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:cobe01100] cobe_M00621   Glycine cleavage system [PATH:cobe01100] cobe_M00793   dTDP-L-rhamnose biosynthesis [PATH:cobe01100] cobe_M00844   Arginine biosynthesis, ornithine => arginine [PATH:cobe01100] cobe_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cobe01100] cobe_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:cobe01100] cobe_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cobe01100] cobe_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cobe01100] cobe_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:cobe01100] cobe_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cobe01100] cobe_M00919   Ectoine degradation, ectoine => aspartate [PATH:cobe01100] cobe_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cobe01100] cobe_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:cobe01100] cobe_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:cobe01100] cobe_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:cobe01100] cobe_M00970   Proline degradation, proline => glutamate [PATH:cobe01100] cobe_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:cobe01100] Organism Cobetia sp. AM6 [GN:cobe] Related pathway cobe00010   Glycolysis / Gluconeogenesis cobe00020   Citrate cycle (TCA cycle) cobe00030   Pentose phosphate pathway cobe00040   Pentose and glucuronate interconversions cobe00051   Fructose and mannose metabolism cobe00052   Galactose metabolism cobe00053   Ascorbate and aldarate metabolism cobe00061   Fatty acid biosynthesis cobe00071   Fatty acid degradation cobe00130   Ubiquinone and other terpenoid-quinone biosynthesis cobe00190   Oxidative phosphorylation cobe00220   Arginine biosynthesis cobe00230   Purine metabolism cobe00240   Pyrimidine metabolism cobe00250   Alanine, aspartate and glutamate metabolism cobe00260   Glycine, serine and threonine metabolism cobe00261   Monobactam biosynthesis cobe00270   Cysteine and methionine metabolism cobe00280   Valine, leucine and isoleucine degradation cobe00290   Valine, leucine and isoleucine biosynthesis cobe00300   Lysine biosynthesis cobe00310   Lysine degradation cobe00330   Arginine and proline metabolism cobe00332   Carbapenem biosynthesis cobe00340   Histidine metabolism cobe00350   Tyrosine metabolism cobe00360   Phenylalanine metabolism cobe00361   Chlorocyclohexane and chlorobenzene degradation cobe00362   Benzoate degradation cobe00364   Fluorobenzoate degradation cobe00380   Tryptophan metabolism cobe00400   Phenylalanine, tyrosine and tryptophan biosynthesis cobe00401   Novobiocin biosynthesis cobe00410   beta-Alanine metabolism cobe00430   Taurine and hypotaurine metabolism cobe00440   Phosphonate and phosphinate metabolism cobe00450   Selenocompound metabolism cobe00460   Cyanoamino acid metabolism cobe00470   D-Amino acid metabolism cobe00480   Glutathione metabolism cobe00500   Starch and sucrose metabolism cobe00520   Amino sugar and nucleotide sugar metabolism cobe00521   Streptomycin biosynthesis cobe00523   Polyketide sugar unit biosynthesis cobe00525   Acarbose and validamycin biosynthesis cobe00540   Lipopolysaccharide biosynthesis cobe00541   O-Antigen nucleotide sugar biosynthesis cobe00543   Exopolysaccharide biosynthesis cobe00550   Peptidoglycan biosynthesis cobe00552   Teichoic acid biosynthesis cobe00561   Glycerolipid metabolism cobe00562   Inositol phosphate metabolism cobe00564   Glycerophospholipid metabolism cobe00565   Ether lipid metabolism cobe00592   alpha-Linolenic acid metabolism cobe00600   Sphingolipid metabolism cobe00620   Pyruvate metabolism cobe00622   Xylene degradation cobe00623   Toluene degradation cobe00625   Chloroalkane and chloroalkene degradation cobe00626   Naphthalene degradation cobe00627   Aminobenzoate degradation cobe00630   Glyoxylate and dicarboxylate metabolism cobe00633   Nitrotoluene degradation cobe00640   Propanoate metabolism cobe00643   Styrene degradation cobe00650   Butanoate metabolism cobe00660   C5-Branched dibasic acid metabolism cobe00670   One carbon pool by folate cobe00680   Methane metabolism cobe00710   Carbon fixation by Calvin cycle cobe00720   Other carbon fixation pathways cobe00730   Thiamine metabolism cobe00740   Riboflavin metabolism cobe00750   Vitamin B6 metabolism cobe00760   Nicotinate and nicotinamide metabolism cobe00770   Pantothenate and CoA biosynthesis cobe00780   Biotin metabolism cobe00785   Lipoic acid metabolism cobe00790   Folate biosynthesis cobe00791   Atrazine degradation cobe00860   Porphyrin metabolism cobe00900   Terpenoid backbone biosynthesis cobe00903   Limonene degradation cobe00907   Pinene, camphor and geraniol degradation cobe00910   Nitrogen metabolism cobe00920   Sulfur metabolism cobe00930   Caprolactam degradation cobe00999   Biosynthesis of various plant secondary metabolites cobe01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system