KEGG   PATHWAY: codo01100
Entry
codo01100                   Pathway                                
Name
Metabolic pathways - Comamonas odontotermitis
Class
Pathway map
codo01100  Metabolic pathways
codo01100

Module
codo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:codo01100]
codo_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:codo01100]
codo_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:codo01100]
codo_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:codo01100]
codo_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:codo01100]
codo_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:codo01100]
codo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:codo01100]
codo_M00012  Glyoxylate cycle [PATH:codo01100]
codo_M00015  Proline biosynthesis, glutamate => proline [PATH:codo01100]
codo_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:codo01100]
codo_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:codo01100]
codo_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:codo01100]
codo_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:codo01100]
codo_M00021  Cysteine biosynthesis, serine => cysteine [PATH:codo01100]
codo_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:codo01100]
codo_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:codo01100]
codo_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:codo01100]
codo_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:codo01100]
codo_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:codo01100]
codo_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:codo01100]
codo_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:codo01100]
codo_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:codo01100]
codo_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:codo01100]
codo_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:codo01100]
codo_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:codo01100]
codo_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:codo01100]
codo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:codo01100]
codo_M00063  CMP-KDO biosynthesis [PATH:codo01100]
codo_M00082  Fatty acid biosynthesis, initiation [PATH:codo01100]
codo_M00083  Fatty acid biosynthesis, elongation [PATH:codo01100]
codo_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:codo01100]
codo_M00087  beta-Oxidation [PATH:codo01100]
codo_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:codo01100]
codo_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:codo01100]
codo_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:codo01100]
codo_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:codo01100]
codo_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:codo01100]
codo_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:codo01100]
codo_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:codo01100]
codo_M00135  GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:codo01100]
codo_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:codo01100]
codo_M00149  Succinate dehydrogenase, prokaryotes [PATH:codo01100]
codo_M00151  Cytochrome bc1 complex respiratory unit [PATH:codo01100]
codo_M00155  Cytochrome c oxidase, prokaryotes [PATH:codo01100]
codo_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:codo01100]
codo_M00168  CAM (Crassulacean acid metabolism), dark [PATH:codo01100]
codo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:codo01100]
codo_M00417  Cytochrome o ubiquinol oxidase [PATH:codo01100]
codo_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:codo01100]
codo_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:codo01100]
codo_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:codo01100]
codo_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:codo01100]
codo_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:codo01100]
codo_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:codo01100]
codo_M00621  Glycine cleavage system [PATH:codo01100]
codo_M00793  dTDP-L-rhamnose biosynthesis [PATH:codo01100]
codo_M00844  Arginine biosynthesis, ornithine => arginine [PATH:codo01100]
codo_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:codo01100]
codo_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:codo01100]
codo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:codo01100]
codo_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:codo01100]
codo_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:codo01100]
codo_M00970  Proline degradation, proline => glutamate [PATH:codo01100]
Organism
Comamonas odontotermitis [GN:codo]
Related
pathway
codo00010  Glycolysis / Gluconeogenesis
codo00020  Citrate cycle (TCA cycle)
codo00030  Pentose phosphate pathway
codo00040  Pentose and glucuronate interconversions
codo00051  Fructose and mannose metabolism
codo00052  Galactose metabolism
codo00053  Ascorbate and aldarate metabolism
codo00061  Fatty acid biosynthesis
codo00071  Fatty acid degradation
codo00074  Mycolic acid biosynthesis
codo00130  Ubiquinone and other terpenoid-quinone biosynthesis
codo00190  Oxidative phosphorylation
codo00220  Arginine biosynthesis
codo00230  Purine metabolism
codo00240  Pyrimidine metabolism
codo00250  Alanine, aspartate and glutamate metabolism
codo00260  Glycine, serine and threonine metabolism
codo00261  Monobactam biosynthesis
codo00270  Cysteine and methionine metabolism
codo00280  Valine, leucine and isoleucine degradation
codo00290  Valine, leucine and isoleucine biosynthesis
codo00300  Lysine biosynthesis
codo00310  Lysine degradation
codo00311  Penicillin and cephalosporin biosynthesis
codo00330  Arginine and proline metabolism
codo00332  Carbapenem biosynthesis
codo00340  Histidine metabolism
codo00350  Tyrosine metabolism
codo00360  Phenylalanine metabolism
codo00361  Chlorocyclohexane and chlorobenzene degradation
codo00362  Benzoate degradation
codo00364  Fluorobenzoate degradation
codo00380  Tryptophan metabolism
codo00400  Phenylalanine, tyrosine and tryptophan biosynthesis
codo00401  Novobiocin biosynthesis
codo00410  beta-Alanine metabolism
codo00450  Selenocompound metabolism
codo00460  Cyanoamino acid metabolism
codo00470  D-Amino acid metabolism
codo00480  Glutathione metabolism
codo00500  Starch and sucrose metabolism
codo00520  Amino sugar and nucleotide sugar metabolism
codo00521  Streptomycin biosynthesis
codo00523  Polyketide sugar unit biosynthesis
codo00525  Acarbose and validamycin biosynthesis
codo00540  Lipopolysaccharide biosynthesis
codo00541  O-Antigen nucleotide sugar biosynthesis
codo00543  Exopolysaccharide biosynthesis
codo00550  Peptidoglycan biosynthesis
codo00552  Teichoic acid biosynthesis
codo00561  Glycerolipid metabolism
codo00562  Inositol phosphate metabolism
codo00564  Glycerophospholipid metabolism
codo00565  Ether lipid metabolism
codo00592  alpha-Linolenic acid metabolism
codo00620  Pyruvate metabolism
codo00621  Dioxin degradation
codo00622  Xylene degradation
codo00623  Toluene degradation
codo00625  Chloroalkane and chloroalkene degradation
codo00626  Naphthalene degradation
codo00627  Aminobenzoate degradation
codo00630  Glyoxylate and dicarboxylate metabolism
codo00633  Nitrotoluene degradation
codo00640  Propanoate metabolism
codo00643  Styrene degradation
codo00650  Butanoate metabolism
codo00660  C5-Branched dibasic acid metabolism
codo00670  One carbon pool by folate
codo00680  Methane metabolism
codo00710  Carbon fixation by Calvin cycle
codo00720  Other carbon fixation pathways
codo00730  Thiamine metabolism
codo00740  Riboflavin metabolism
codo00750  Vitamin B6 metabolism
codo00760  Nicotinate and nicotinamide metabolism
codo00770  Pantothenate and CoA biosynthesis
codo00780  Biotin metabolism
codo00785  Lipoic acid metabolism
codo00790  Folate biosynthesis
codo00860  Porphyrin metabolism
codo00900  Terpenoid backbone biosynthesis
codo00906  Carotenoid biosynthesis
codo00907  Pinene, camphor and geraniol degradation
codo00910  Nitrogen metabolism
codo00920  Sulfur metabolism
codo00930  Caprolactam degradation
codo00999  Biosynthesis of various plant secondary metabolites
codo01040  Biosynthesis of unsaturated fatty acids
codo01053  Biosynthesis of siderophore group nonribosomal peptides
codo01055  Biosynthesis of vancomycin group antibiotics
KO pathway
ko01100   
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