PATHWAY: cof01100 Help Entry cof01100                    Pathway                                 Name Metabolic pathways - Comamonas flocculans Class BRITE hierarchy Pathway map cof01100   Metabolic pathways Module cof_M00002   Glycolysis, core module involving three-carbon compounds [PATH:cof01100] cof_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cof01100] cof_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:cof01100] cof_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cof01100] cof_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:cof01100] cof_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cof01100] cof_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cof01100] cof_M00012   Glyoxylate cycle [PATH:cof01100] cof_M00015   Proline biosynthesis, glutamate => proline [PATH:cof01100] cof_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cof01100] cof_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cof01100] cof_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:cof01100] cof_M00021   Cysteine biosynthesis, serine => cysteine [PATH:cof01100] cof_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cof01100] cof_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:cof01100] cof_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:cof01100] cof_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:cof01100] cof_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:cof01100] cof_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:cof01100] cof_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:cof01100] cof_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cof01100] cof_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cof01100] cof_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cof01100] cof_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cof01100] cof_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cof01100] cof_M00063   CMP-KDO biosynthesis [PATH:cof01100] cof_M00082   Fatty acid biosynthesis, initiation [PATH:cof01100] cof_M00083   Fatty acid biosynthesis, elongation [PATH:cof01100] cof_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:cof01100] cof_M00087   beta-Oxidation [PATH:cof01100] cof_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cof01100] cof_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:cof01100] cof_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cof01100] cof_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:cof01100] cof_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cof01100] cof_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:cof01100] cof_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:cof01100] cof_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:cof01100] cof_M00149   Succinate dehydrogenase, prokaryotes [PATH:cof01100] cof_M00151   Cytochrome bc1 complex respiratory unit [PATH:cof01100] cof_M00155   Cytochrome c oxidase, prokaryotes [PATH:cof01100] cof_M00156   Cytochrome c oxidase, cbb3-type [PATH:cof01100] cof_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:cof01100] cof_M00168   CAM (Crassulacean acid metabolism), dark [PATH:cof01100] cof_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cof01100] cof_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cof01100] cof_M00526   Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:cof01100] cof_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:cof01100] cof_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:cof01100] cof_M00548   Benzene degradation, benzene => catechol [PATH:cof01100] cof_M00569   Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA [PATH:cof01100] cof_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cof01100] cof_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:cof01100] cof_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:cof01100] cof_M00621   Glycine cleavage system [PATH:cof01100] cof_M00793   dTDP-L-rhamnose biosynthesis [PATH:cof01100] cof_M00844   Arginine biosynthesis, ornithine => arginine [PATH:cof01100] cof_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cof01100] cof_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cof01100] cof_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cof01100] cof_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:cof01100] cof_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cof01100] cof_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:cof01100] cof_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:cof01100] cof_M00970   Proline degradation, proline => glutamate [PATH:cof01100] Organism Comamonas flocculans [GN:cof] Related pathway cof00010   Glycolysis / Gluconeogenesis cof00020   Citrate cycle (TCA cycle) cof00030   Pentose phosphate pathway cof00040   Pentose and glucuronate interconversions cof00051   Fructose and mannose metabolism cof00052   Galactose metabolism cof00061   Fatty acid biosynthesis cof00071   Fatty acid degradation cof00130   Ubiquinone and other terpenoid-quinone biosynthesis cof00190   Oxidative phosphorylation cof00220   Arginine biosynthesis cof00230   Purine metabolism cof00240   Pyrimidine metabolism cof00250   Alanine, aspartate and glutamate metabolism cof00260   Glycine, serine and threonine metabolism cof00261   Monobactam biosynthesis cof00270   Cysteine and methionine metabolism cof00280   Valine, leucine and isoleucine degradation cof00290   Valine, leucine and isoleucine biosynthesis cof00300   Lysine biosynthesis cof00310   Lysine degradation cof00330   Arginine and proline metabolism cof00332   Carbapenem biosynthesis cof00340   Histidine metabolism cof00350   Tyrosine metabolism cof00360   Phenylalanine metabolism cof00361   Chlorocyclohexane and chlorobenzene degradation cof00362   Benzoate degradation cof00364   Fluorobenzoate degradation cof00380   Tryptophan metabolism cof00400   Phenylalanine, tyrosine and tryptophan biosynthesis cof00401   Novobiocin biosynthesis cof00410   beta-Alanine metabolism cof00430   Taurine and hypotaurine metabolism cof00450   Selenocompound metabolism cof00460   Cyanoamino acid metabolism cof00470   D-Amino acid metabolism cof00480   Glutathione metabolism cof00500   Starch and sucrose metabolism cof00520   Amino sugar and nucleotide sugar metabolism cof00521   Streptomycin biosynthesis cof00523   Polyketide sugar unit biosynthesis cof00525   Acarbose and validamycin biosynthesis cof00540   Lipopolysaccharide biosynthesis cof00541   O-Antigen nucleotide sugar biosynthesis cof00543   Exopolysaccharide biosynthesis cof00550   Peptidoglycan biosynthesis cof00552   Teichoic acid biosynthesis cof00561   Glycerolipid metabolism cof00562   Inositol phosphate metabolism cof00564   Glycerophospholipid metabolism cof00565   Ether lipid metabolism cof00592   alpha-Linolenic acid metabolism cof00620   Pyruvate metabolism cof00621   Dioxin degradation cof00622   Xylene degradation cof00623   Toluene degradation cof00625   Chloroalkane and chloroalkene degradation cof00626   Naphthalene degradation cof00627   Aminobenzoate degradation cof00630   Glyoxylate and dicarboxylate metabolism cof00633   Nitrotoluene degradation cof00640   Propanoate metabolism cof00643   Styrene degradation cof00650   Butanoate metabolism cof00660   C5-Branched dibasic acid metabolism cof00670   One carbon pool by folate cof00680   Methane metabolism cof00730   Thiamine metabolism cof00740   Riboflavin metabolism cof00750   Vitamin B6 metabolism cof00760   Nicotinate and nicotinamide metabolism cof00770   Pantothenate and CoA biosynthesis cof00780   Biotin metabolism cof00785   Lipoic acid metabolism cof00790   Folate biosynthesis cof00860   Porphyrin metabolism cof00900   Terpenoid backbone biosynthesis cof00906   Carotenoid biosynthesis cof00907   Pinene, camphor and geraniol degradation cof00910   Nitrogen metabolism cof00920   Sulfur metabolism cof00930   Caprolactam degradation cof00999   Biosynthesis of various plant secondary metabolites cof01040   Biosynthesis of unsaturated fatty acids cof01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

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