KEGG   PATHWAY: colw01100
Entry
colw01100                   Pathway                                
Name
Metabolic pathways - Colwellia sp. PAMC 21821
Class
Pathway map
colw01100  Metabolic pathways
colw01100

Module
colw_M00002  Glycolysis, core module involving three-carbon compounds [PATH:colw01100]
colw_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:colw01100]
colw_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:colw01100]
colw_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:colw01100]
colw_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:colw01100]
colw_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:colw01100]
colw_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:colw01100]
colw_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:colw01100]
colw_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:colw01100]
colw_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:colw01100]
colw_M00012  Glyoxylate cycle [PATH:colw01100]
colw_M00015  Proline biosynthesis, glutamate => proline [PATH:colw01100]
colw_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:colw01100]
colw_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:colw01100]
colw_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:colw01100]
colw_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:colw01100]
colw_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:colw01100]
colw_M00021  Cysteine biosynthesis, serine => cysteine [PATH:colw01100]
colw_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:colw01100]
colw_M00026  Histidine biosynthesis, PRPP => histidine [PATH:colw01100]
colw_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:colw01100]
colw_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:colw01100]
colw_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:colw01100]
colw_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:colw01100]
colw_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:colw01100]
colw_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:colw01100]
colw_M00063  CMP-KDO biosynthesis [PATH:colw01100]
colw_M00082  Fatty acid biosynthesis, initiation [PATH:colw01100]
colw_M00083  Fatty acid biosynthesis, elongation [PATH:colw01100]
colw_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:colw01100]
colw_M00087  beta-Oxidation [PATH:colw01100]
colw_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:colw01100]
colw_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:colw01100]
colw_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:colw01100]
colw_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:colw01100]
colw_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:colw01100]
colw_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:colw01100]
colw_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:colw01100]
colw_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:colw01100]
colw_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:colw01100]
colw_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:colw01100]
colw_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:colw01100]
colw_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:colw01100]
colw_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:colw01100]
colw_M00149  Succinate dehydrogenase, prokaryotes [PATH:colw01100]
colw_M00151  Cytochrome bc1 complex respiratory unit [PATH:colw01100]
colw_M00155  Cytochrome c oxidase, prokaryotes [PATH:colw01100]
colw_M00156  Cytochrome c oxidase, cbb3-type [PATH:colw01100]
colw_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:colw01100]
colw_M00168  CAM (Crassulacean acid metabolism), dark [PATH:colw01100]
colw_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:colw01100]
colw_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:colw01100]
colw_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:colw01100]
colw_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:colw01100]
colw_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:colw01100]
colw_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:colw01100]
colw_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:colw01100]
colw_M00555  Betaine biosynthesis, choline => betaine [PATH:colw01100]
colw_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:colw01100]
colw_M00621  Glycine cleavage system [PATH:colw01100]
colw_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:colw01100]
colw_M00793  dTDP-L-rhamnose biosynthesis [PATH:colw01100]
colw_M00844  Arginine biosynthesis, ornithine => arginine [PATH:colw01100]
colw_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:colw01100]
colw_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:colw01100]
colw_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:colw01100]
colw_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:colw01100]
colw_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:colw01100]
colw_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:colw01100]
colw_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:colw01100]
colw_M00970  Proline degradation, proline => glutamate [PATH:colw01100]
Organism
Colwellia sp. PAMC 21821 [GN:colw]
Related
pathway
colw00010  Glycolysis / Gluconeogenesis
colw00020  Citrate cycle (TCA cycle)
colw00030  Pentose phosphate pathway
colw00040  Pentose and glucuronate interconversions
colw00051  Fructose and mannose metabolism
colw00052  Galactose metabolism
colw00053  Ascorbate and aldarate metabolism
colw00061  Fatty acid biosynthesis
colw00071  Fatty acid degradation
colw00121  Secondary bile acid biosynthesis
colw00130  Ubiquinone and other terpenoid-quinone biosynthesis
colw00190  Oxidative phosphorylation
colw00220  Arginine biosynthesis
colw00230  Purine metabolism
colw00240  Pyrimidine metabolism
colw00250  Alanine, aspartate and glutamate metabolism
colw00260  Glycine, serine and threonine metabolism
colw00261  Monobactam biosynthesis
colw00270  Cysteine and methionine metabolism
colw00280  Valine, leucine and isoleucine degradation
colw00290  Valine, leucine and isoleucine biosynthesis
colw00300  Lysine biosynthesis
colw00310  Lysine degradation
colw00330  Arginine and proline metabolism
colw00332  Carbapenem biosynthesis
colw00340  Histidine metabolism
colw00350  Tyrosine metabolism
colw00360  Phenylalanine metabolism
colw00361  Chlorocyclohexane and chlorobenzene degradation
colw00362  Benzoate degradation
colw00380  Tryptophan metabolism
colw00400  Phenylalanine, tyrosine and tryptophan biosynthesis
colw00401  Novobiocin biosynthesis
colw00410  beta-Alanine metabolism
colw00430  Taurine and hypotaurine metabolism
colw00450  Selenocompound metabolism
colw00460  Cyanoamino acid metabolism
colw00470  D-Amino acid metabolism
colw00480  Glutathione metabolism
colw00500  Starch and sucrose metabolism
colw00511  Other glycan degradation
colw00520  Amino sugar and nucleotide sugar metabolism
colw00521  Streptomycin biosynthesis
colw00523  Polyketide sugar unit biosynthesis
colw00525  Acarbose and validamycin biosynthesis
colw00540  Lipopolysaccharide biosynthesis
colw00541  O-Antigen nucleotide sugar biosynthesis
colw00542  O-Antigen repeat unit biosynthesis
colw00543  Exopolysaccharide biosynthesis
colw00550  Peptidoglycan biosynthesis
colw00552  Teichoic acid biosynthesis
colw00561  Glycerolipid metabolism
colw00562  Inositol phosphate metabolism
colw00564  Glycerophospholipid metabolism
colw00565  Ether lipid metabolism
colw00590  Arachidonic acid metabolism
colw00592  alpha-Linolenic acid metabolism
colw00600  Sphingolipid metabolism
colw00620  Pyruvate metabolism
colw00621  Dioxin degradation
colw00622  Xylene degradation
colw00625  Chloroalkane and chloroalkene degradation
colw00626  Naphthalene degradation
colw00627  Aminobenzoate degradation
colw00630  Glyoxylate and dicarboxylate metabolism
colw00633  Nitrotoluene degradation
colw00640  Propanoate metabolism
colw00643  Styrene degradation
colw00650  Butanoate metabolism
colw00660  C5-Branched dibasic acid metabolism
colw00670  One carbon pool by folate
colw00680  Methane metabolism
colw00710  Carbon fixation by Calvin cycle
colw00720  Other carbon fixation pathways
colw00730  Thiamine metabolism
colw00740  Riboflavin metabolism
colw00750  Vitamin B6 metabolism
colw00760  Nicotinate and nicotinamide metabolism
colw00770  Pantothenate and CoA biosynthesis
colw00780  Biotin metabolism
colw00785  Lipoic acid metabolism
colw00790  Folate biosynthesis
colw00860  Porphyrin metabolism
colw00900  Terpenoid backbone biosynthesis
colw00907  Pinene, camphor and geraniol degradation
colw00910  Nitrogen metabolism
colw00920  Sulfur metabolism
colw00930  Caprolactam degradation
colw00946  Degradation of flavonoids
colw00984  Steroid degradation
colw00999  Biosynthesis of various plant secondary metabolites
colw01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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