PATHWAY: coy01100 Help Entry coy01100                    Pathway                                 Name Metabolic pathways - Chitinophaga oryzae Class BRITE hierarchy Pathway map coy01100   Metabolic pathways Module coy_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:coy01100] coy_M00002   Glycolysis, core module involving three-carbon compounds [PATH:coy01100] coy_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:coy01100] coy_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:coy01100] coy_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:coy01100] coy_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:coy01100] coy_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:coy01100] coy_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:coy01100] coy_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:coy01100] coy_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:coy01100] coy_M00015   Proline biosynthesis, glutamate => proline [PATH:coy01100] coy_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:coy01100] coy_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:coy01100] coy_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:coy01100] coy_M00026   Histidine biosynthesis, PRPP => histidine [PATH:coy01100] coy_M00035   Methionine degradation [PATH:coy01100] coy_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:coy01100] coy_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:coy01100] coy_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:coy01100] coy_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:coy01100] coy_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:coy01100] coy_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:coy01100] coy_M00063   CMP-KDO biosynthesis [PATH:coy01100] coy_M00082   Fatty acid biosynthesis, initiation [PATH:coy01100] coy_M00083   Fatty acid biosynthesis, elongation [PATH:coy01100] coy_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:coy01100] coy_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:coy01100] coy_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:coy01100] coy_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:coy01100] coy_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:coy01100] coy_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:coy01100] coy_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:coy01100] coy_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:coy01100] coy_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:coy01100] coy_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:coy01100] coy_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:coy01100] coy_M00155   Cytochrome c oxidase, prokaryotes [PATH:coy01100] coy_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:coy01100] coy_M00168   CAM (Crassulacean acid metabolism), dark [PATH:coy01100] coy_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:coy01100] coy_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:coy01100] coy_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:coy01100] coy_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:coy01100] coy_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:coy01100] coy_M00535   Isoleucine biosynthesis, pyruvate => 2-oxobutanoate [PATH:coy01100] coy_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:coy01100] coy_M00621   Glycine cleavage system [PATH:coy01100] coy_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:coy01100] coy_M00793   dTDP-L-rhamnose biosynthesis [PATH:coy01100] coy_M00844   Arginine biosynthesis, ornithine => arginine [PATH:coy01100] coy_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:coy01100] coy_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:coy01100] coy_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:coy01100] coy_M00970   Proline degradation, proline => glutamate [PATH:coy01100] coy_M00972   Proline metabolism [PATH:coy01100] Organism Chitinophaga oryzae [GN:coy] Related pathway coy00010   Glycolysis / Gluconeogenesis coy00020   Citrate cycle (TCA cycle) coy00030   Pentose phosphate pathway coy00040   Pentose and glucuronate interconversions coy00051   Fructose and mannose metabolism coy00052   Galactose metabolism coy00053   Ascorbate and aldarate metabolism coy00061   Fatty acid biosynthesis coy00071   Fatty acid degradation coy00074   Mycolic acid biosynthesis coy00121   Secondary bile acid biosynthesis coy00130   Ubiquinone and other terpenoid-quinone biosynthesis coy00190   Oxidative phosphorylation coy00220   Arginine biosynthesis coy00230   Purine metabolism coy00240   Pyrimidine metabolism coy00250   Alanine, aspartate and glutamate metabolism coy00260   Glycine, serine and threonine metabolism coy00261   Monobactam biosynthesis coy00270   Cysteine and methionine metabolism coy00280   Valine, leucine and isoleucine degradation coy00290   Valine, leucine and isoleucine biosynthesis coy00300   Lysine biosynthesis coy00310   Lysine degradation coy00311   Penicillin and cephalosporin biosynthesis coy00330   Arginine and proline metabolism coy00332   Carbapenem biosynthesis coy00340   Histidine metabolism coy00350   Tyrosine metabolism coy00360   Phenylalanine metabolism coy00361   Chlorocyclohexane and chlorobenzene degradation coy00362   Benzoate degradation coy00364   Fluorobenzoate degradation coy00380   Tryptophan metabolism coy00400   Phenylalanine, tyrosine and tryptophan biosynthesis coy00401   Novobiocin biosynthesis coy00405   Phenazine biosynthesis coy00410   beta-Alanine metabolism coy00430   Taurine and hypotaurine metabolism coy00450   Selenocompound metabolism coy00460   Cyanoamino acid metabolism coy00470   D-Amino acid metabolism coy00480   Glutathione metabolism coy00500   Starch and sucrose metabolism coy00511   Other glycan degradation coy00520   Amino sugar and nucleotide sugar metabolism coy00521   Streptomycin biosynthesis coy00523   Polyketide sugar unit biosynthesis coy00525   Acarbose and validamycin biosynthesis coy00540   Lipopolysaccharide biosynthesis coy00541   O-Antigen nucleotide sugar biosynthesis coy00543   Exopolysaccharide biosynthesis coy00550   Peptidoglycan biosynthesis coy00552   Teichoic acid biosynthesis coy00561   Glycerolipid metabolism coy00562   Inositol phosphate metabolism coy00564   Glycerophospholipid metabolism coy00572   Arabinogalactan biosynthesis - Mycobacterium coy00592   alpha-Linolenic acid metabolism coy00600   Sphingolipid metabolism coy00620   Pyruvate metabolism coy00623   Toluene degradation coy00625   Chloroalkane and chloroalkene degradation coy00626   Naphthalene degradation coy00627   Aminobenzoate degradation coy00630   Glyoxylate and dicarboxylate metabolism coy00633   Nitrotoluene degradation coy00640   Propanoate metabolism coy00643   Styrene degradation coy00650   Butanoate metabolism coy00660   C5-Branched dibasic acid metabolism coy00670   One carbon pool by folate coy00680   Methane metabolism coy00710   Carbon fixation by Calvin cycle coy00720   Other carbon fixation pathways coy00730   Thiamine metabolism coy00740   Riboflavin metabolism coy00750   Vitamin B6 metabolism coy00760   Nicotinate and nicotinamide metabolism coy00770   Pantothenate and CoA biosynthesis coy00780   Biotin metabolism coy00785   Lipoic acid metabolism coy00790   Folate biosynthesis coy00860   Porphyrin metabolism coy00900   Terpenoid backbone biosynthesis coy00907   Pinene, camphor and geraniol degradation coy00910   Nitrogen metabolism coy00920   Sulfur metabolism coy00930   Caprolactam degradation coy00946   Degradation of flavonoids coy00998   Biosynthesis of various antibiotics coy00999   Biosynthesis of various plant secondary metabolites coy01040   Biosynthesis of unsaturated fatty acids coy01055   Biosynthesis of vancomycin group antibiotics coy01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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