KEGG   PATHWAY: cpot01100
Entry
cpot01100                   Pathway                                
Name
Metabolic pathways - Citrobacter portucalensis
Class
Pathway map
cpot01100  Metabolic pathways
cpot01100

Module
cpot_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cpot01100]
cpot_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cpot01100]
cpot_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cpot01100]
cpot_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cpot01100]
cpot_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cpot01100]
cpot_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cpot01100]
cpot_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cpot01100]
cpot_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:cpot01100]
cpot_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:cpot01100]
cpot_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cpot01100]
cpot_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cpot01100]
cpot_M00012  Glyoxylate cycle [PATH:cpot01100]
cpot_M00015  Proline biosynthesis, glutamate => proline [PATH:cpot01100]
cpot_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cpot01100]
cpot_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:cpot01100]
cpot_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cpot01100]
cpot_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cpot01100]
cpot_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:cpot01100]
cpot_M00021  Cysteine biosynthesis, serine => cysteine [PATH:cpot01100]
cpot_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cpot01100]
cpot_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:cpot01100]
cpot_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:cpot01100]
cpot_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:cpot01100]
cpot_M00026  Histidine biosynthesis, PRPP => histidine [PATH:cpot01100]
cpot_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:cpot01100]
cpot_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:cpot01100]
cpot_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cpot01100]
cpot_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cpot01100]
cpot_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cpot01100]
cpot_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:cpot01100]
cpot_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cpot01100]
cpot_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cpot01100]
cpot_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:cpot01100]
cpot_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cpot01100]
cpot_M00063  CMP-KDO biosynthesis [PATH:cpot01100]
cpot_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:cpot01100]
cpot_M00082  Fatty acid biosynthesis, initiation [PATH:cpot01100]
cpot_M00083  Fatty acid biosynthesis, elongation [PATH:cpot01100]
cpot_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:cpot01100]
cpot_M00087  beta-Oxidation [PATH:cpot01100]
cpot_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cpot01100]
cpot_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:cpot01100]
cpot_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cpot01100]
cpot_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:cpot01100]
cpot_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cpot01100]
cpot_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:cpot01100]
cpot_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cpot01100]
cpot_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:cpot01100]
cpot_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cpot01100]
cpot_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:cpot01100]
cpot_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cpot01100]
cpot_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:cpot01100]
cpot_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cpot01100]
cpot_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:cpot01100]
cpot_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:cpot01100]
cpot_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:cpot01100]
cpot_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:cpot01100]
cpot_M00149  Succinate dehydrogenase, prokaryotes [PATH:cpot01100]
cpot_M00150  Fumarate reductase, prokaryotes [PATH:cpot01100]
cpot_M00151  Cytochrome bc1 complex respiratory unit [PATH:cpot01100]
cpot_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:cpot01100]
cpot_M00168  CAM (Crassulacean acid metabolism), dark [PATH:cpot01100]
cpot_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:cpot01100]
cpot_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cpot01100]
cpot_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:cpot01100]
cpot_M00417  Cytochrome o ubiquinol oxidase [PATH:cpot01100]
cpot_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cpot01100]
cpot_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:cpot01100]
cpot_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:cpot01100]
cpot_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:cpot01100]
cpot_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cpot01100]
cpot_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:cpot01100]
cpot_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cpot01100]
cpot_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cpot01100]
cpot_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:cpot01100]
cpot_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:cpot01100]
cpot_M00621  Glycine cleavage system [PATH:cpot01100]
cpot_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cpot01100]
cpot_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cpot01100]
cpot_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:cpot01100]
cpot_M00844  Arginine biosynthesis, ornithine => arginine [PATH:cpot01100]
cpot_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cpot01100]
cpot_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cpot01100]
cpot_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:cpot01100]
cpot_M00878  Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA [PATH:cpot01100]
cpot_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:cpot01100]
cpot_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cpot01100]
cpot_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cpot01100]
cpot_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:cpot01100]
cpot_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cpot01100]
cpot_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:cpot01100]
cpot_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cpot01100]
cpot_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:cpot01100]
cpot_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:cpot01100]
cpot_M00970  Proline degradation, proline => glutamate [PATH:cpot01100]
Organism
Citrobacter portucalensis [GN:cpot]
Related
pathway
cpot00010  Glycolysis / Gluconeogenesis
cpot00020  Citrate cycle (TCA cycle)
cpot00030  Pentose phosphate pathway
cpot00040  Pentose and glucuronate interconversions
cpot00051  Fructose and mannose metabolism
cpot00052  Galactose metabolism
cpot00053  Ascorbate and aldarate metabolism
cpot00061  Fatty acid biosynthesis
cpot00071  Fatty acid degradation
cpot00130  Ubiquinone and other terpenoid-quinone biosynthesis
cpot00190  Oxidative phosphorylation
cpot00220  Arginine biosynthesis
cpot00230  Purine metabolism
cpot00240  Pyrimidine metabolism
cpot00250  Alanine, aspartate and glutamate metabolism
cpot00260  Glycine, serine and threonine metabolism
cpot00261  Monobactam biosynthesis
cpot00270  Cysteine and methionine metabolism
cpot00280  Valine, leucine and isoleucine degradation
cpot00290  Valine, leucine and isoleucine biosynthesis
cpot00300  Lysine biosynthesis
cpot00310  Lysine degradation
cpot00330  Arginine and proline metabolism
cpot00332  Carbapenem biosynthesis
cpot00340  Histidine metabolism
cpot00350  Tyrosine metabolism
cpot00360  Phenylalanine metabolism
cpot00361  Chlorocyclohexane and chlorobenzene degradation
cpot00362  Benzoate degradation
cpot00364  Fluorobenzoate degradation
cpot00380  Tryptophan metabolism
cpot00400  Phenylalanine, tyrosine and tryptophan biosynthesis
cpot00401  Novobiocin biosynthesis
cpot00410  beta-Alanine metabolism
cpot00430  Taurine and hypotaurine metabolism
cpot00440  Phosphonate and phosphinate metabolism
cpot00450  Selenocompound metabolism
cpot00460  Cyanoamino acid metabolism
cpot00470  D-Amino acid metabolism
cpot00480  Glutathione metabolism
cpot00500  Starch and sucrose metabolism
cpot00511  Other glycan degradation
cpot00520  Amino sugar and nucleotide sugar metabolism
cpot00521  Streptomycin biosynthesis
cpot00523  Polyketide sugar unit biosynthesis
cpot00525  Acarbose and validamycin biosynthesis
cpot00540  Lipopolysaccharide biosynthesis
cpot00541  O-Antigen nucleotide sugar biosynthesis
cpot00542  O-Antigen repeat unit biosynthesis
cpot00543  Exopolysaccharide biosynthesis
cpot00550  Peptidoglycan biosynthesis
cpot00552  Teichoic acid biosynthesis
cpot00561  Glycerolipid metabolism
cpot00562  Inositol phosphate metabolism
cpot00564  Glycerophospholipid metabolism
cpot00565  Ether lipid metabolism
cpot00592  alpha-Linolenic acid metabolism
cpot00600  Sphingolipid metabolism
cpot00620  Pyruvate metabolism
cpot00621  Dioxin degradation
cpot00622  Xylene degradation
cpot00623  Toluene degradation
cpot00625  Chloroalkane and chloroalkene degradation
cpot00626  Naphthalene degradation
cpot00627  Aminobenzoate degradation
cpot00630  Glyoxylate and dicarboxylate metabolism
cpot00633  Nitrotoluene degradation
cpot00640  Propanoate metabolism
cpot00650  Butanoate metabolism
cpot00660  C5-Branched dibasic acid metabolism
cpot00670  One carbon pool by folate
cpot00680  Methane metabolism
cpot00710  Carbon fixation by Calvin cycle
cpot00720  Other carbon fixation pathways
cpot00730  Thiamine metabolism
cpot00740  Riboflavin metabolism
cpot00750  Vitamin B6 metabolism
cpot00760  Nicotinate and nicotinamide metabolism
cpot00770  Pantothenate and CoA biosynthesis
cpot00780  Biotin metabolism
cpot00785  Lipoic acid metabolism
cpot00790  Folate biosynthesis
cpot00791  Atrazine degradation
cpot00860  Porphyrin metabolism
cpot00900  Terpenoid backbone biosynthesis
cpot00907  Pinene, camphor and geraniol degradation
cpot00910  Nitrogen metabolism
cpot00920  Sulfur metabolism
cpot00930  Caprolactam degradation
cpot00946  Degradation of flavonoids
cpot00999  Biosynthesis of various plant secondary metabolites
cpot01040  Biosynthesis of unsaturated fatty acids
cpot01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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