KEGG   PATHWAY: cuc01230
Entry
cuc01230                    Pathway                                
Name
Biosynthesis of amino acids - Corynebacterium ulcerans 809
Description
This map presents a modular architecture of the biosynthesis pathways of twenty amino acids, which may be viewed as consisting of the core part and its extensions. The core part is the KEGG module for conversion of three-carbon compounds from glyceraldehyde-3P to pyruvate [MD:M00002], together with the pathways around serine and glycine. This KEGG module is the most conserved one in the KEGG MODULE database and is found in almost all the completely sequenced genomes. The extensions are the pathways containing the reaction modules RM001, RM033, RM032, and RM002 for biosynthesis of branched-chain amino acids (left) and basic amino acids (bottom), and the pathways for biosynthesis of histidine and aromatic amino acids (top right). It is interesting to note that the so-called essential amino acids that cannot be synthesized in human and other organisms generally appear in these extensions. Furthermore, the bottom extension of basic amino acids appears to be most divergent containing multiple pathways for lysine biosynthesis and multiple gene sets for arginine biosynthesis.
Class
Pathway map
cuc01230  Biosynthesis of amino acids
cuc01230

Module
cuc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cuc01230]
cuc_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cuc01230]
cuc_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cuc01230]
cuc_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cuc01230]
cuc_M00015  Proline biosynthesis, glutamate => proline [PATH:cuc01230]
cuc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cuc01230]
cuc_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cuc01230]
cuc_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cuc01230]
cuc_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:cuc01230]
cuc_M00021  Cysteine biosynthesis, serine => cysteine [PATH:cuc01230]
cuc_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:cuc01230]
cuc_M00026  Histidine biosynthesis, PRPP => histidine [PATH:cuc01230]
cuc_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:cuc01230]
cuc_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cuc01230]
cuc_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cuc01230]
cuc_M00844  Arginine biosynthesis, ornithine => arginine [PATH:cuc01230]
Organism
Corynebacterium ulcerans 809 [GN:cuc]
KO pathway
ko01230   
LinkDB

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