PATHWAY: dee01100 Help Entry dee01100                    Pathway                                 Name Metabolic pathways - Deefgea piscis Class BRITE hierarchy Pathway map dee01100   Metabolic pathways Module dee_M00002   Glycolysis, core module involving three-carbon compounds [PATH:dee01100] dee_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:dee01100] dee_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:dee01100] dee_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:dee01100] dee_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:dee01100] dee_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:dee01100] dee_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:dee01100] dee_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:dee01100] dee_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:dee01100] dee_M00012   Glyoxylate cycle [PATH:dee01100] dee_M00015   Proline biosynthesis, glutamate => proline [PATH:dee01100] dee_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:dee01100] dee_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:dee01100] dee_M00021   Cysteine biosynthesis, serine => cysteine [PATH:dee01100] dee_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:dee01100] dee_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:dee01100] dee_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:dee01100] dee_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:dee01100] dee_M00026   Histidine biosynthesis, PRPP => histidine [PATH:dee01100] dee_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:dee01100] dee_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dee01100] dee_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dee01100] dee_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dee01100] dee_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:dee01100] dee_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dee01100] dee_M00063   CMP-KDO biosynthesis [PATH:dee01100] dee_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:dee01100] dee_M00082   Fatty acid biosynthesis, initiation [PATH:dee01100] dee_M00083   Fatty acid biosynthesis, elongation [PATH:dee01100] dee_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:dee01100] dee_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:dee01100] dee_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:dee01100] dee_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:dee01100] dee_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:dee01100] dee_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:dee01100] dee_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:dee01100] dee_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:dee01100] dee_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:dee01100] dee_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:dee01100] dee_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:dee01100] dee_M00149   Succinate dehydrogenase, prokaryotes [PATH:dee01100] dee_M00151   Cytochrome bc1 complex respiratory unit [PATH:dee01100] dee_M00155   Cytochrome c oxidase, prokaryotes [PATH:dee01100] dee_M00156   Cytochrome c oxidase, cbb3-type [PATH:dee01100] dee_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:dee01100] dee_M00168   CAM (Crassulacean acid metabolism), dark [PATH:dee01100] dee_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dee01100] dee_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:dee01100] dee_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:dee01100] dee_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:dee01100] dee_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:dee01100] dee_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:dee01100] dee_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:dee01100] dee_M00621   Glycine cleavage system [PATH:dee01100] dee_M00793   dTDP-L-rhamnose biosynthesis [PATH:dee01100] dee_M00844   Arginine biosynthesis, ornithine => arginine [PATH:dee01100] dee_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:dee01100] dee_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:dee01100] dee_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:dee01100] dee_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:dee01100] dee_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:dee01100] dee_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:dee01100] dee_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:dee01100] Organism Deefgea piscis [GN:dee] Related pathway dee00010   Glycolysis / Gluconeogenesis dee00020   Citrate cycle (TCA cycle) dee00030   Pentose phosphate pathway dee00040   Pentose and glucuronate interconversions dee00051   Fructose and mannose metabolism dee00052   Galactose metabolism dee00053   Ascorbate and aldarate metabolism dee00061   Fatty acid biosynthesis dee00071   Fatty acid degradation dee00130   Ubiquinone and other terpenoid-quinone biosynthesis dee00190   Oxidative phosphorylation dee00220   Arginine biosynthesis dee00230   Purine metabolism dee00240   Pyrimidine metabolism dee00250   Alanine, aspartate and glutamate metabolism dee00260   Glycine, serine and threonine metabolism dee00261   Monobactam biosynthesis dee00270   Cysteine and methionine metabolism dee00280   Valine, leucine and isoleucine degradation dee00290   Valine, leucine and isoleucine biosynthesis dee00300   Lysine biosynthesis dee00310   Lysine degradation dee00330   Arginine and proline metabolism dee00332   Carbapenem biosynthesis dee00340   Histidine metabolism dee00350   Tyrosine metabolism dee00360   Phenylalanine metabolism dee00361   Chlorocyclohexane and chlorobenzene degradation dee00362   Benzoate degradation dee00364   Fluorobenzoate degradation dee00380   Tryptophan metabolism dee00400   Phenylalanine, tyrosine and tryptophan biosynthesis dee00401   Novobiocin biosynthesis dee00405   Phenazine biosynthesis dee00410   beta-Alanine metabolism dee00430   Taurine and hypotaurine metabolism dee00440   Phosphonate and phosphinate metabolism dee00450   Selenocompound metabolism dee00460   Cyanoamino acid metabolism dee00470   D-Amino acid metabolism dee00480   Glutathione metabolism dee00500   Starch and sucrose metabolism dee00511   Other glycan degradation dee00514   Other types of O-glycan biosynthesis dee00515   Mannose type O-glycan biosynthesis dee00520   Amino sugar and nucleotide sugar metabolism dee00521   Streptomycin biosynthesis dee00523   Polyketide sugar unit biosynthesis dee00525   Acarbose and validamycin biosynthesis dee00540   Lipopolysaccharide biosynthesis dee00541   O-Antigen nucleotide sugar biosynthesis dee00543   Exopolysaccharide biosynthesis dee00550   Peptidoglycan biosynthesis dee00552   Teichoic acid biosynthesis dee00561   Glycerolipid metabolism dee00562   Inositol phosphate metabolism dee00564   Glycerophospholipid metabolism dee00565   Ether lipid metabolism dee00592   alpha-Linolenic acid metabolism dee00600   Sphingolipid metabolism dee00620   Pyruvate metabolism dee00623   Toluene degradation dee00625   Chloroalkane and chloroalkene degradation dee00626   Naphthalene degradation dee00630   Glyoxylate and dicarboxylate metabolism dee00640   Propanoate metabolism dee00650   Butanoate metabolism dee00660   C5-Branched dibasic acid metabolism dee00670   One carbon pool by folate dee00680   Methane metabolism dee00710   Carbon fixation by Calvin cycle dee00720   Other carbon fixation pathways dee00730   Thiamine metabolism dee00740   Riboflavin metabolism dee00750   Vitamin B6 metabolism dee00760   Nicotinate and nicotinamide metabolism dee00770   Pantothenate and CoA biosynthesis dee00780   Biotin metabolism dee00785   Lipoic acid metabolism dee00790   Folate biosynthesis dee00860   Porphyrin metabolism dee00900   Terpenoid backbone biosynthesis dee00906   Carotenoid biosynthesis dee00907   Pinene, camphor and geraniol degradation dee00910   Nitrogen metabolism dee00920   Sulfur metabolism dee00998   Biosynthesis of various antibiotics dee00999   Biosynthesis of various plant secondary metabolites dee01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system