PATHWAY: dko01100 Help Entry dko01100                    Pathway                                 Name Metabolic pathways - Dokdonella koreensis Class BRITE hierarchy Pathway map dko01100   Metabolic pathways Module dko_M00002   Glycolysis, core module involving three-carbon compounds [PATH:dko01100] dko_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dko01100] dko_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:dko01100] dko_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:dko01100] dko_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:dko01100] dko_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:dko01100] dko_M00012   Glyoxylate cycle [PATH:dko01100] dko_M00015   Proline biosynthesis, glutamate => proline [PATH:dko01100] dko_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:dko01100] dko_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:dko01100] dko_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:dko01100] dko_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:dko01100] dko_M00026   Histidine biosynthesis, PRPP => histidine [PATH:dko01100] dko_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:dko01100] dko_M00035   Methionine degradation [PATH:dko01100] dko_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:dko01100] dko_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:dko01100] dko_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dko01100] dko_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dko01100] dko_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dko01100] dko_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:dko01100] dko_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dko01100] dko_M00063   CMP-KDO biosynthesis [PATH:dko01100] dko_M00082   Fatty acid biosynthesis, initiation [PATH:dko01100] dko_M00083   Fatty acid biosynthesis, elongation [PATH:dko01100] dko_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:dko01100] dko_M00087   beta-Oxidation [PATH:dko01100] dko_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:dko01100] dko_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:dko01100] dko_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:dko01100] dko_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:dko01100] dko_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:dko01100] dko_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:dko01100] dko_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:dko01100] dko_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:dko01100] dko_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:dko01100] dko_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:dko01100] dko_M00149   Succinate dehydrogenase, prokaryotes [PATH:dko01100] dko_M00151   Cytochrome bc1 complex respiratory unit [PATH:dko01100] dko_M00155   Cytochrome c oxidase, prokaryotes [PATH:dko01100] dko_M00156   Cytochrome c oxidase, cbb3-type [PATH:dko01100] dko_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:dko01100] dko_M00165   Reductive pentose phosphate cycle (Calvin cycle) [PATH:dko01100] dko_M00168   CAM (Crassulacean acid metabolism), dark [PATH:dko01100] dko_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:dko01100] dko_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dko01100] dko_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:dko01100] dko_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:dko01100] dko_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:dko01100] dko_M00621   Glycine cleavage system [PATH:dko01100] dko_M00793   dTDP-L-rhamnose biosynthesis [PATH:dko01100] dko_M00845   Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:dko01100] dko_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:dko01100] dko_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:dko01100] dko_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:dko01100] dko_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:dko01100] dko_M00970   Proline degradation, proline => glutamate [PATH:dko01100] Organism Dokdonella koreensis [GN:dko] Related pathway dko00010   Glycolysis / Gluconeogenesis dko00020   Citrate cycle (TCA cycle) dko00030   Pentose phosphate pathway dko00040   Pentose and glucuronate interconversions dko00051   Fructose and mannose metabolism dko00052   Galactose metabolism dko00053   Ascorbate and aldarate metabolism dko00061   Fatty acid biosynthesis dko00071   Fatty acid degradation dko00130   Ubiquinone and other terpenoid-quinone biosynthesis dko00190   Oxidative phosphorylation dko00220   Arginine biosynthesis dko00230   Purine metabolism dko00240   Pyrimidine metabolism dko00250   Alanine, aspartate and glutamate metabolism dko00260   Glycine, serine and threonine metabolism dko00261   Monobactam biosynthesis dko00270   Cysteine and methionine metabolism dko00280   Valine, leucine and isoleucine degradation dko00290   Valine, leucine and isoleucine biosynthesis dko00300   Lysine biosynthesis dko00310   Lysine degradation dko00311   Penicillin and cephalosporin biosynthesis dko00330   Arginine and proline metabolism dko00332   Carbapenem biosynthesis dko00340   Histidine metabolism dko00350   Tyrosine metabolism dko00360   Phenylalanine metabolism dko00361   Chlorocyclohexane and chlorobenzene degradation dko00362   Benzoate degradation dko00364   Fluorobenzoate degradation dko00380   Tryptophan metabolism dko00400   Phenylalanine, tyrosine and tryptophan biosynthesis dko00401   Novobiocin biosynthesis dko00410   beta-Alanine metabolism dko00430   Taurine and hypotaurine metabolism dko00450   Selenocompound metabolism dko00460   Cyanoamino acid metabolism dko00470   D-Amino acid metabolism dko00480   Glutathione metabolism dko00500   Starch and sucrose metabolism dko00520   Amino sugar and nucleotide sugar metabolism dko00521   Streptomycin biosynthesis dko00523   Polyketide sugar unit biosynthesis dko00525   Acarbose and validamycin biosynthesis dko00540   Lipopolysaccharide biosynthesis dko00541   O-Antigen nucleotide sugar biosynthesis dko00550   Peptidoglycan biosynthesis dko00552   Teichoic acid biosynthesis dko00561   Glycerolipid metabolism dko00562   Inositol phosphate metabolism dko00564   Glycerophospholipid metabolism dko00565   Ether lipid metabolism dko00590   Arachidonic acid metabolism dko00591   Linoleic acid metabolism dko00592   alpha-Linolenic acid metabolism dko00620   Pyruvate metabolism dko00623   Toluene degradation dko00625   Chloroalkane and chloroalkene degradation dko00626   Naphthalene degradation dko00630   Glyoxylate and dicarboxylate metabolism dko00640   Propanoate metabolism dko00643   Styrene degradation dko00650   Butanoate metabolism dko00660   C5-Branched dibasic acid metabolism dko00670   One carbon pool by folate dko00680   Methane metabolism dko00710   Carbon fixation by Calvin cycle dko00720   Other carbon fixation pathways dko00730   Thiamine metabolism dko00740   Riboflavin metabolism dko00750   Vitamin B6 metabolism dko00760   Nicotinate and nicotinamide metabolism dko00770   Pantothenate and CoA biosynthesis dko00780   Biotin metabolism dko00785   Lipoic acid metabolism dko00790   Folate biosynthesis dko00860   Porphyrin metabolism dko00900   Terpenoid backbone biosynthesis dko00906   Carotenoid biosynthesis dko00907   Pinene, camphor and geraniol degradation dko00910   Nitrogen metabolism dko00920   Sulfur metabolism dko00930   Caprolactam degradation dko00999   Biosynthesis of various plant secondary metabolites dko01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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