PATHWAY: dli01100 Help Entry dli01100                    Pathway                                 Name Metabolic pathways - Desulfonema limicola Class BRITE hierarchy Pathway map dli01100   Metabolic pathways Module dli_M00002   Glycolysis, core module involving three-carbon compounds [PATH:dli01100] dli_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:dli01100] dli_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:dli01100] dli_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:dli01100] dli_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:dli01100] dli_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:dli01100] dli_M00015   Proline biosynthesis, glutamate => proline [PATH:dli01100] dli_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:dli01100] dli_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:dli01100] dli_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:dli01100] dli_M00021   Cysteine biosynthesis, serine => cysteine [PATH:dli01100] dli_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:dli01100] dli_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:dli01100] dli_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:dli01100] dli_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:dli01100] dli_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dli01100] dli_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dli01100] dli_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dli01100] dli_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:dli01100] dli_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:dli01100] dli_M00063   CMP-KDO biosynthesis [PATH:dli01100] dli_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:dli01100] dli_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:dli01100] dli_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:dli01100] dli_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:dli01100] dli_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:dli01100] dli_M00169   CAM (Crassulacean acid metabolism), light [PATH:dli01100] dli_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:dli01100] dli_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dli01100] dli_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:dli01100] dli_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:dli01100] dli_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:dli01100] dli_M00596   Dissimilatory sulfate reduction, sulfate => H2S [PATH:dli01100] dli_M00621   Glycine cleavage system [PATH:dli01100] dli_M00793   dTDP-L-rhamnose biosynthesis [PATH:dli01100] dli_M00844   Arginine biosynthesis, ornithine => arginine [PATH:dli01100] dli_M00847   Heme biosynthesis, archaea, siroheme => heme [PATH:dli01100] dli_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:dli01100] dli_M00930   Menaquinone biosynthesis, futalosine pathway [PATH:dli01100] dli_M00970   Proline degradation, proline => glutamate [PATH:dli01100] Organism Desulfonema limicola [GN:dli] Related pathway dli00010   Glycolysis / Gluconeogenesis dli00020   Citrate cycle (TCA cycle) dli00030   Pentose phosphate pathway dli00040   Pentose and glucuronate interconversions dli00051   Fructose and mannose metabolism dli00052   Galactose metabolism dli00053   Ascorbate and aldarate metabolism dli00061   Fatty acid biosynthesis dli00071   Fatty acid degradation dli00130   Ubiquinone and other terpenoid-quinone biosynthesis dli00190   Oxidative phosphorylation dli00220   Arginine biosynthesis dli00230   Purine metabolism dli00240   Pyrimidine metabolism dli00250   Alanine, aspartate and glutamate metabolism dli00260   Glycine, serine and threonine metabolism dli00261   Monobactam biosynthesis dli00270   Cysteine and methionine metabolism dli00280   Valine, leucine and isoleucine degradation dli00290   Valine, leucine and isoleucine biosynthesis dli00300   Lysine biosynthesis dli00310   Lysine degradation dli00311   Penicillin and cephalosporin biosynthesis dli00330   Arginine and proline metabolism dli00332   Carbapenem biosynthesis dli00340   Histidine metabolism dli00350   Tyrosine metabolism dli00360   Phenylalanine metabolism dli00362   Benzoate degradation dli00380   Tryptophan metabolism dli00400   Phenylalanine, tyrosine and tryptophan biosynthesis dli00401   Novobiocin biosynthesis dli00410   beta-Alanine metabolism dli00430   Taurine and hypotaurine metabolism dli00450   Selenocompound metabolism dli00460   Cyanoamino acid metabolism dli00470   D-Amino acid metabolism dli00480   Glutathione metabolism dli00500   Starch and sucrose metabolism dli00520   Amino sugar and nucleotide sugar metabolism dli00521   Streptomycin biosynthesis dli00523   Polyketide sugar unit biosynthesis dli00525   Acarbose and validamycin biosynthesis dli00540   Lipopolysaccharide biosynthesis dli00541   O-Antigen nucleotide sugar biosynthesis dli00542   O-Antigen repeat unit biosynthesis dli00543   Exopolysaccharide biosynthesis dli00550   Peptidoglycan biosynthesis dli00552   Teichoic acid biosynthesis dli00561   Glycerolipid metabolism dli00562   Inositol phosphate metabolism dli00564   Glycerophospholipid metabolism dli00592   alpha-Linolenic acid metabolism dli00620   Pyruvate metabolism dli00627   Aminobenzoate degradation dli00630   Glyoxylate and dicarboxylate metabolism dli00633   Nitrotoluene degradation dli00640   Propanoate metabolism dli00650   Butanoate metabolism dli00660   C5-Branched dibasic acid metabolism dli00670   One carbon pool by folate dli00680   Methane metabolism dli00710   Carbon fixation by Calvin cycle dli00720   Other carbon fixation pathways dli00730   Thiamine metabolism dli00740   Riboflavin metabolism dli00750   Vitamin B6 metabolism dli00760   Nicotinate and nicotinamide metabolism dli00770   Pantothenate and CoA biosynthesis dli00780   Biotin metabolism dli00785   Lipoic acid metabolism dli00790   Folate biosynthesis dli00860   Porphyrin metabolism dli00900   Terpenoid backbone biosynthesis dli00907   Pinene, camphor and geraniol degradation dli00910   Nitrogen metabolism dli00920   Sulfur metabolism dli00998   Biosynthesis of various antibiotics dli00999   Biosynthesis of various plant secondary metabolites dli01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

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