PATHWAY: dok01100 Help Entry dok01100                    Pathway                                 Name Metabolic pathways - Dokdonia sp. MED134 Class BRITE hierarchy Pathway map dok01100   Metabolic pathways Module dok_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dok01100] dok_M00002   Glycolysis, core module involving three-carbon compounds [PATH:dok01100] dok_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dok01100] dok_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:dok01100] dok_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:dok01100] dok_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:dok01100] dok_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:dok01100] dok_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:dok01100] dok_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:dok01100] dok_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:dok01100] dok_M00012   Glyoxylate cycle [PATH:dok01100] dok_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:dok01100] dok_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:dok01100] dok_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:dok01100] dok_M00026   Histidine biosynthesis, PRPP => histidine [PATH:dok01100] dok_M00035   Methionine degradation [PATH:dok01100] dok_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:dok01100] dok_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dok01100] dok_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dok01100] dok_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dok01100] dok_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:dok01100] dok_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dok01100] dok_M00063   CMP-KDO biosynthesis [PATH:dok01100] dok_M00082   Fatty acid biosynthesis, initiation [PATH:dok01100] dok_M00083   Fatty acid biosynthesis, elongation [PATH:dok01100] dok_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:dok01100] dok_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:dok01100] dok_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:dok01100] dok_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:dok01100] dok_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:dok01100] dok_M00155   Cytochrome c oxidase, prokaryotes [PATH:dok01100] dok_M00156   Cytochrome c oxidase, cbb3-type [PATH:dok01100] dok_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:dok01100] dok_M00168   CAM (Crassulacean acid metabolism), dark [PATH:dok01100] dok_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dok01100] dok_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:dok01100] dok_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:dok01100] dok_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:dok01100] dok_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:dok01100] dok_M00621   Glycine cleavage system [PATH:dok01100] dok_M00793   dTDP-L-rhamnose biosynthesis [PATH:dok01100] dok_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:dok01100] dok_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:dok01100] dok_M00970   Proline degradation, proline => glutamate [PATH:dok01100] dok_M00972   Proline metabolism [PATH:dok01100] Organism Dokdonia sp. MED134 [GN:dok] Related pathway dok00010   Glycolysis / Gluconeogenesis dok00020   Citrate cycle (TCA cycle) dok00030   Pentose phosphate pathway dok00040   Pentose and glucuronate interconversions dok00051   Fructose and mannose metabolism dok00052   Galactose metabolism dok00053   Ascorbate and aldarate metabolism dok00061   Fatty acid biosynthesis dok00071   Fatty acid degradation dok00130   Ubiquinone and other terpenoid-quinone biosynthesis dok00190   Oxidative phosphorylation dok00220   Arginine biosynthesis dok00230   Purine metabolism dok00240   Pyrimidine metabolism dok00250   Alanine, aspartate and glutamate metabolism dok00260   Glycine, serine and threonine metabolism dok00261   Monobactam biosynthesis dok00270   Cysteine and methionine metabolism dok00280   Valine, leucine and isoleucine degradation dok00290   Valine, leucine and isoleucine biosynthesis dok00300   Lysine biosynthesis dok00310   Lysine degradation dok00330   Arginine and proline metabolism dok00340   Histidine metabolism dok00350   Tyrosine metabolism dok00360   Phenylalanine metabolism dok00361   Chlorocyclohexane and chlorobenzene degradation dok00362   Benzoate degradation dok00364   Fluorobenzoate degradation dok00380   Tryptophan metabolism dok00400   Phenylalanine, tyrosine and tryptophan biosynthesis dok00401   Novobiocin biosynthesis dok00410   beta-Alanine metabolism dok00430   Taurine and hypotaurine metabolism dok00450   Selenocompound metabolism dok00460   Cyanoamino acid metabolism dok00470   D-Amino acid metabolism dok00480   Glutathione metabolism dok00500   Starch and sucrose metabolism dok00511   Other glycan degradation dok00520   Amino sugar and nucleotide sugar metabolism dok00521   Streptomycin biosynthesis dok00523   Polyketide sugar unit biosynthesis dok00525   Acarbose and validamycin biosynthesis dok00540   Lipopolysaccharide biosynthesis dok00541   O-Antigen nucleotide sugar biosynthesis dok00543   Exopolysaccharide biosynthesis dok00550   Peptidoglycan biosynthesis dok00552   Teichoic acid biosynthesis dok00561   Glycerolipid metabolism dok00564   Glycerophospholipid metabolism dok00592   alpha-Linolenic acid metabolism dok00600   Sphingolipid metabolism dok00620   Pyruvate metabolism dok00623   Toluene degradation dok00625   Chloroalkane and chloroalkene degradation dok00630   Glyoxylate and dicarboxylate metabolism dok00633   Nitrotoluene degradation dok00640   Propanoate metabolism dok00643   Styrene degradation dok00650   Butanoate metabolism dok00660   C5-Branched dibasic acid metabolism dok00670   One carbon pool by folate dok00680   Methane metabolism dok00710   Carbon fixation by Calvin cycle dok00720   Other carbon fixation pathways dok00730   Thiamine metabolism dok00740   Riboflavin metabolism dok00750   Vitamin B6 metabolism dok00760   Nicotinate and nicotinamide metabolism dok00770   Pantothenate and CoA biosynthesis dok00780   Biotin metabolism dok00785   Lipoic acid metabolism dok00790   Folate biosynthesis dok00860   Porphyrin metabolism dok00900   Terpenoid backbone biosynthesis dok00906   Carotenoid biosynthesis dok00907   Pinene, camphor and geraniol degradation dok00910   Nitrogen metabolism dok00920   Sulfur metabolism dok01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system