KEGG   PATHWAY: dosa01100
Entry
dosa01100                   Pathway                                
Name
Metabolic pathways - Oryza sativa japonica (Japanese rice) (RAPDB)
Class
Pathway map
dosa01100  Metabolic pathways
dosa01100

Module
dosa_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dosa01100]
dosa_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dosa01100]
dosa_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dosa01100]
dosa_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:dosa01100]
dosa_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:dosa01100]
dosa_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:dosa01100]
dosa_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:dosa01100]
dosa_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:dosa01100]
dosa_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:dosa01100]
dosa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:dosa01100]
dosa_M00012  Glyoxylate cycle [PATH:dosa01100]
dosa_M00015  Proline biosynthesis, glutamate => proline [PATH:dosa01100]
dosa_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:dosa01100]
dosa_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:dosa01100]
dosa_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:dosa01100]
dosa_M00021  Cysteine biosynthesis, serine => cysteine [PATH:dosa01100]
dosa_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:dosa01100]
dosa_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:dosa01100]
dosa_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:dosa01100]
dosa_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:dosa01100]
dosa_M00034  Methionine salvage pathway [PATH:dosa01100]
dosa_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:dosa01100]
dosa_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:dosa01100]
dosa_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:dosa01100]
dosa_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:dosa01100]
dosa_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:dosa01100]
dosa_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dosa01100]
dosa_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dosa01100]
dosa_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dosa01100]
dosa_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:dosa01100]
dosa_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dosa01100]
dosa_M00073  N-glycan precursor trimming [PATH:dosa01100]
dosa_M00081  Pectin degradation [PATH:dosa01100]
dosa_M00083  Fatty acid biosynthesis, elongation [PATH:dosa01100]
dosa_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:dosa01100]
dosa_M00087  beta-Oxidation [PATH:dosa01100]
dosa_M00089  Triacylglycerol biosynthesis [PATH:dosa01100]
dosa_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:dosa01100]
dosa_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:dosa01100]
dosa_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:dosa01100]
dosa_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:dosa01100]
dosa_M00098  Acylglycerol degradation [PATH:dosa01100]
dosa_M00100  Sphingosine degradation [PATH:dosa01100]
dosa_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:dosa01100]
dosa_M00113  Jasmonic acid biosynthesis [PATH:dosa01100]
dosa_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:dosa01100]
dosa_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:dosa01100]
dosa_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:dosa01100]
dosa_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:dosa01100]
dosa_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:dosa01100]
dosa_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:dosa01100]
dosa_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:dosa01100]
dosa_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:dosa01100]
dosa_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:dosa01100]
dosa_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:dosa01100]
dosa_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:dosa01100]
dosa_M00148  Succinate dehydrogenase (ubiquinone) [PATH:dosa01100]
dosa_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:dosa01100]
dosa_M00168  CAM (Crassulacean acid metabolism), dark [PATH:dosa01100]
dosa_M00169  CAM (Crassulacean acid metabolism), light [PATH:dosa01100]
dosa_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:dosa01100]
dosa_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:dosa01100]
dosa_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:dosa01100]
dosa_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:dosa01100]
dosa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dosa01100]
dosa_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:dosa01100]
dosa_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:dosa01100]
dosa_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:dosa01100]
dosa_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:dosa01100]
dosa_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:dosa01100]
dosa_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:dosa01100]
dosa_M00532  Photorespiration [PATH:dosa01100]
dosa_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:dosa01100]
dosa_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:dosa01100]
dosa_M00621  Glycine cleavage system [PATH:dosa01100]
dosa_M00844  Arginine biosynthesis, ornithine => arginine [PATH:dosa01100]
dosa_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:dosa01100]
dosa_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:dosa01100]
dosa_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:dosa01100]
dosa_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:dosa01100]
dosa_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:dosa01100]
dosa_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:dosa01100]
dosa_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:dosa01100]
dosa_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:dosa01100]
dosa_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:dosa01100]
dosa_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:dosa01100]
dosa_M00936  Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:dosa01100]
dosa_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:dosa01100]
dosa_M00953  Mugineic acid biosynthesis, methionine => 3-epihydroxymugineic acid [PATH:dosa01100]
dosa_M00970  Proline degradation, proline => glutamate [PATH:dosa01100]
Organism
Oryza sativa japonica (Japanese rice) (RAPDB) [GN:dosa]
Related
pathway
dosa00010  Glycolysis / Gluconeogenesis
dosa00020  Citrate cycle (TCA cycle)
dosa00030  Pentose phosphate pathway
dosa00040  Pentose and glucuronate interconversions
dosa00051  Fructose and mannose metabolism
dosa00052  Galactose metabolism
dosa00053  Ascorbate and aldarate metabolism
dosa00061  Fatty acid biosynthesis
dosa00062  Fatty acid elongation
dosa00071  Fatty acid degradation
dosa00073  Cutin, suberine and wax biosynthesis
dosa00100  Steroid biosynthesis
dosa00130  Ubiquinone and other terpenoid-quinone biosynthesis
dosa00190  Oxidative phosphorylation
dosa00195  Photosynthesis
dosa00196  Photosynthesis - antenna proteins
dosa00220  Arginine biosynthesis
dosa00230  Purine metabolism
dosa00232  Caffeine metabolism
dosa00240  Pyrimidine metabolism
dosa00250  Alanine, aspartate and glutamate metabolism
dosa00260  Glycine, serine and threonine metabolism
dosa00261  Monobactam biosynthesis
dosa00270  Cysteine and methionine metabolism
dosa00280  Valine, leucine and isoleucine degradation
dosa00290  Valine, leucine and isoleucine biosynthesis
dosa00300  Lysine biosynthesis
dosa00310  Lysine degradation
dosa00330  Arginine and proline metabolism
dosa00340  Histidine metabolism
dosa00350  Tyrosine metabolism
dosa00360  Phenylalanine metabolism
dosa00380  Tryptophan metabolism
dosa00400  Phenylalanine, tyrosine and tryptophan biosynthesis
dosa00402  Benzoxazinoid biosynthesis
dosa00410  beta-Alanine metabolism
dosa00430  Taurine and hypotaurine metabolism
dosa00440  Phosphonate and phosphinate metabolism
dosa00450  Selenocompound metabolism
dosa00460  Cyanoamino acid metabolism
dosa00470  D-Amino acid metabolism
dosa00480  Glutathione metabolism
dosa00500  Starch and sucrose metabolism
dosa00510  N-Glycan biosynthesis
dosa00511  Other glycan degradation
dosa00513  Various types of N-glycan biosynthesis
dosa00514  Other types of O-glycan biosynthesis
dosa00520  Amino sugar and nucleotide sugar metabolism
dosa00523  Polyketide sugar unit biosynthesis
dosa00531  Glycosaminoglycan degradation
dosa00543  Exopolysaccharide biosynthesis
dosa00561  Glycerolipid metabolism
dosa00562  Inositol phosphate metabolism
dosa00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
dosa00564  Glycerophospholipid metabolism
dosa00565  Ether lipid metabolism
dosa00590  Arachidonic acid metabolism
dosa00591  Linoleic acid metabolism
dosa00592  alpha-Linolenic acid metabolism
dosa00600  Sphingolipid metabolism
dosa00601  Glycosphingolipid biosynthesis - lacto and neolacto series
dosa00603  Glycosphingolipid biosynthesis - globo and isoglobo series
dosa00604  Glycosphingolipid biosynthesis - ganglio series
dosa00620  Pyruvate metabolism
dosa00630  Glyoxylate and dicarboxylate metabolism
dosa00640  Propanoate metabolism
dosa00650  Butanoate metabolism
dosa00660  C5-Branched dibasic acid metabolism
dosa00670  One carbon pool by folate
dosa00710  Carbon fixation by Calvin cycle
dosa00730  Thiamine metabolism
dosa00740  Riboflavin metabolism
dosa00750  Vitamin B6 metabolism
dosa00760  Nicotinate and nicotinamide metabolism
dosa00770  Pantothenate and CoA biosynthesis
dosa00780  Biotin metabolism
dosa00785  Lipoic acid metabolism
dosa00790  Folate biosynthesis
dosa00860  Porphyrin metabolism
dosa00900  Terpenoid backbone biosynthesis
dosa00902  Monoterpenoid biosynthesis
dosa00904  Diterpenoid biosynthesis
dosa00905  Brassinosteroid biosynthesis
dosa00906  Carotenoid biosynthesis
dosa00908  Zeatin biosynthesis
dosa00909  Sesquiterpenoid and triterpenoid biosynthesis
dosa00910  Nitrogen metabolism
dosa00920  Sulfur metabolism
dosa00940  Phenylpropanoid biosynthesis
dosa00941  Flavonoid biosynthesis
dosa00942  Anthocyanin biosynthesis
dosa00944  Flavone and flavonol biosynthesis
dosa00950  Isoquinoline alkaloid biosynthesis
dosa00960  Tropane, piperidine and pyridine alkaloid biosynthesis
dosa00965  Betalain biosynthesis
dosa00966  Glucosinolate biosynthesis
dosa00999  Biosynthesis of various plant secondary metabolites
dosa01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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