PATHWAY: doy01100 Help Entry doy01100                    Pathway                                 Name Metabolic pathways - Devosia oryziradicis Class BRITE hierarchy Pathway map doy01100   Metabolic pathways Module doy_M00002   Glycolysis, core module involving three-carbon compounds [PATH:doy01100] doy_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:doy01100] doy_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:doy01100] doy_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:doy01100] doy_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:doy01100] doy_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:doy01100] doy_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:doy01100] doy_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:doy01100] doy_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:doy01100] doy_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:doy01100] doy_M00015   Proline biosynthesis, glutamate => proline [PATH:doy01100] doy_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:doy01100] doy_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:doy01100] doy_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:doy01100] doy_M00021   Cysteine biosynthesis, serine => cysteine [PATH:doy01100] doy_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:doy01100] doy_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:doy01100] doy_M00026   Histidine biosynthesis, PRPP => histidine [PATH:doy01100] doy_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:doy01100] doy_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:doy01100] doy_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:doy01100] doy_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:doy01100] doy_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:doy01100] doy_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:doy01100] doy_M00082   Fatty acid biosynthesis, initiation [PATH:doy01100] doy_M00083   Fatty acid biosynthesis, elongation [PATH:doy01100] doy_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:doy01100] doy_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:doy01100] doy_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:doy01100] doy_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:doy01100] doy_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:doy01100] doy_M00149   Succinate dehydrogenase, prokaryotes [PATH:doy01100] doy_M00151   Cytochrome bc1 complex respiratory unit [PATH:doy01100] doy_M00155   Cytochrome c oxidase, prokaryotes [PATH:doy01100] doy_M00156   Cytochrome c oxidase, cbb3-type [PATH:doy01100] doy_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:doy01100] doy_M00169   CAM (Crassulacean acid metabolism), light [PATH:doy01100] doy_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:doy01100] doy_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:doy01100] doy_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:doy01100] doy_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:doy01100] doy_M00555   Betaine biosynthesis, choline => betaine [PATH:doy01100] doy_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:doy01100] doy_M00621   Glycine cleavage system [PATH:doy01100] doy_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:doy01100] doy_M00793   dTDP-L-rhamnose biosynthesis [PATH:doy01100] doy_M00844   Arginine biosynthesis, ornithine => arginine [PATH:doy01100] doy_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:doy01100] doy_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:doy01100] doy_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:doy01100] doy_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:doy01100] doy_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:doy01100] doy_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:doy01100] doy_M00970   Proline degradation, proline => glutamate [PATH:doy01100] Organism Devosia oryziradicis [GN:doy] Related pathway doy00010   Glycolysis / Gluconeogenesis doy00020   Citrate cycle (TCA cycle) doy00030   Pentose phosphate pathway doy00040   Pentose and glucuronate interconversions doy00051   Fructose and mannose metabolism doy00052   Galactose metabolism doy00053   Ascorbate and aldarate metabolism doy00061   Fatty acid biosynthesis doy00071   Fatty acid degradation doy00130   Ubiquinone and other terpenoid-quinone biosynthesis doy00190   Oxidative phosphorylation doy00220   Arginine biosynthesis doy00230   Purine metabolism doy00240   Pyrimidine metabolism doy00250   Alanine, aspartate and glutamate metabolism doy00260   Glycine, serine and threonine metabolism doy00261   Monobactam biosynthesis doy00270   Cysteine and methionine metabolism doy00280   Valine, leucine and isoleucine degradation doy00290   Valine, leucine and isoleucine biosynthesis doy00300   Lysine biosynthesis doy00310   Lysine degradation doy00311   Penicillin and cephalosporin biosynthesis doy00330   Arginine and proline metabolism doy00332   Carbapenem biosynthesis doy00340   Histidine metabolism doy00350   Tyrosine metabolism doy00360   Phenylalanine metabolism doy00361   Chlorocyclohexane and chlorobenzene degradation doy00362   Benzoate degradation doy00364   Fluorobenzoate degradation doy00380   Tryptophan metabolism doy00400   Phenylalanine, tyrosine and tryptophan biosynthesis doy00401   Novobiocin biosynthesis doy00405   Phenazine biosynthesis doy00410   beta-Alanine metabolism doy00440   Phosphonate and phosphinate metabolism doy00450   Selenocompound metabolism doy00460   Cyanoamino acid metabolism doy00470   D-Amino acid metabolism doy00480   Glutathione metabolism doy00500   Starch and sucrose metabolism doy00511   Other glycan degradation doy00520   Amino sugar and nucleotide sugar metabolism doy00521   Streptomycin biosynthesis doy00523   Polyketide sugar unit biosynthesis doy00525   Acarbose and validamycin biosynthesis doy00540   Lipopolysaccharide biosynthesis doy00541   O-Antigen nucleotide sugar biosynthesis doy00543   Exopolysaccharide biosynthesis doy00550   Peptidoglycan biosynthesis doy00552   Teichoic acid biosynthesis doy00561   Glycerolipid metabolism doy00562   Inositol phosphate metabolism doy00564   Glycerophospholipid metabolism doy00600   Sphingolipid metabolism doy00620   Pyruvate metabolism doy00622   Xylene degradation doy00623   Toluene degradation doy00625   Chloroalkane and chloroalkene degradation doy00626   Naphthalene degradation doy00627   Aminobenzoate degradation doy00630   Glyoxylate and dicarboxylate metabolism doy00640   Propanoate metabolism doy00643   Styrene degradation doy00650   Butanoate metabolism doy00660   C5-Branched dibasic acid metabolism doy00670   One carbon pool by folate doy00680   Methane metabolism doy00710   Carbon fixation by Calvin cycle doy00720   Other carbon fixation pathways doy00730   Thiamine metabolism doy00740   Riboflavin metabolism doy00750   Vitamin B6 metabolism doy00760   Nicotinate and nicotinamide metabolism doy00770   Pantothenate and CoA biosynthesis doy00780   Biotin metabolism doy00785   Lipoic acid metabolism doy00790   Folate biosynthesis doy00791   Atrazine degradation doy00860   Porphyrin metabolism doy00900   Terpenoid backbone biosynthesis doy00903   Limonene degradation doy00906   Carotenoid biosynthesis doy00907   Pinene, camphor and geraniol degradation doy00910   Nitrogen metabolism doy00920   Sulfur metabolism doy00930   Caprolactam degradation doy00946   Degradation of flavonoids doy00999   Biosynthesis of various plant secondary metabolites doy01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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