PATHWAY: dze01100 Help Entry dze01100                    Pathway                                 Name Metabolic pathways - Dickeya chrysanthemi Class BRITE hierarchy Pathway map dze01100   Metabolic pathways Module dze_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dze01100] dze_M00002   Glycolysis, core module involving three-carbon compounds [PATH:dze01100] dze_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dze01100] dze_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:dze01100] dze_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:dze01100] dze_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:dze01100] dze_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:dze01100] dze_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:dze01100] dze_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:dze01100] dze_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:dze01100] dze_M00012   Glyoxylate cycle [PATH:dze01100] dze_M00015   Proline biosynthesis, glutamate => proline [PATH:dze01100] dze_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:dze01100] dze_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:dze01100] dze_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:dze01100] dze_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:dze01100] dze_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:dze01100] dze_M00021   Cysteine biosynthesis, serine => cysteine [PATH:dze01100] dze_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:dze01100] dze_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:dze01100] dze_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:dze01100] dze_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:dze01100] dze_M00026   Histidine biosynthesis, PRPP => histidine [PATH:dze01100] dze_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:dze01100] dze_M00034   Methionine salvage pathway [PATH:dze01100] dze_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:dze01100] dze_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dze01100] dze_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dze01100] dze_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dze01100] dze_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:dze01100] dze_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:dze01100] dze_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dze01100] dze_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:dze01100] dze_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:dze01100] dze_M00063   CMP-KDO biosynthesis [PATH:dze01100] dze_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:dze01100] dze_M00082   Fatty acid biosynthesis, initiation [PATH:dze01100] dze_M00083   Fatty acid biosynthesis, elongation [PATH:dze01100] dze_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:dze01100] dze_M00087   beta-Oxidation [PATH:dze01100] dze_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:dze01100] dze_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:dze01100] dze_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:dze01100] dze_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:dze01100] dze_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:dze01100] dze_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:dze01100] dze_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:dze01100] dze_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:dze01100] dze_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:dze01100] dze_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:dze01100] dze_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:dze01100] dze_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:dze01100] dze_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:dze01100] dze_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:dze01100] dze_M00149   Succinate dehydrogenase, prokaryotes [PATH:dze01100] dze_M00150   Fumarate reductase, prokaryotes [PATH:dze01100] dze_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:dze01100] dze_M00168   CAM (Crassulacean acid metabolism), dark [PATH:dze01100] dze_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:dze01100] dze_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dze01100] dze_M00417   Cytochrome o ubiquinol oxidase [PATH:dze01100] dze_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:dze01100] dze_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:dze01100] dze_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:dze01100] dze_M00550   Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:dze01100] dze_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:dze01100] dze_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:dze01100] dze_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:dze01100] dze_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:dze01100] dze_M00621   Glycine cleavage system [PATH:dze01100] dze_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:dze01100] dze_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:dze01100] dze_M00675   Carbapenem-3-carboxylate biosynthesis, pyrroline-5-carboxylate + malonyl-CoA => carbapenem-3-carboxylate [PATH:dze01100] dze_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:dze01100] dze_M00793   dTDP-L-rhamnose biosynthesis [PATH:dze01100] dze_M00844   Arginine biosynthesis, ornithine => arginine [PATH:dze01100] dze_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:dze01100] dze_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:dze01100] dze_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:dze01100] dze_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:dze01100] dze_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:dze01100] dze_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:dze01100] dze_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:dze01100] dze_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:dze01100] dze_M00970   Proline degradation, proline => glutamate [PATH:dze01100] Organism Dickeya chrysanthemi [GN:dze] Related pathway dze00010   Glycolysis / Gluconeogenesis dze00020   Citrate cycle (TCA cycle) dze00030   Pentose phosphate pathway dze00040   Pentose and glucuronate interconversions dze00051   Fructose and mannose metabolism dze00052   Galactose metabolism dze00053   Ascorbate and aldarate metabolism dze00061   Fatty acid biosynthesis dze00071   Fatty acid degradation dze00130   Ubiquinone and other terpenoid-quinone biosynthesis dze00190   Oxidative phosphorylation dze00220   Arginine biosynthesis dze00230   Purine metabolism dze00240   Pyrimidine metabolism dze00250   Alanine, aspartate and glutamate metabolism dze00260   Glycine, serine and threonine metabolism dze00261   Monobactam biosynthesis dze00270   Cysteine and methionine metabolism dze00280   Valine, leucine and isoleucine degradation dze00290   Valine, leucine and isoleucine biosynthesis dze00300   Lysine biosynthesis dze00310   Lysine degradation dze00330   Arginine and proline metabolism dze00332   Carbapenem biosynthesis dze00340   Histidine metabolism dze00350   Tyrosine metabolism dze00360   Phenylalanine metabolism dze00361   Chlorocyclohexane and chlorobenzene degradation dze00362   Benzoate degradation dze00364   Fluorobenzoate degradation dze00380   Tryptophan metabolism dze00400   Phenylalanine, tyrosine and tryptophan biosynthesis dze00401   Novobiocin biosynthesis dze00410   beta-Alanine metabolism dze00430   Taurine and hypotaurine metabolism dze00440   Phosphonate and phosphinate metabolism dze00450   Selenocompound metabolism dze00460   Cyanoamino acid metabolism dze00470   D-Amino acid metabolism dze00480   Glutathione metabolism dze00500   Starch and sucrose metabolism dze00511   Other glycan degradation dze00520   Amino sugar and nucleotide sugar metabolism dze00521   Streptomycin biosynthesis dze00523   Polyketide sugar unit biosynthesis dze00525   Acarbose and validamycin biosynthesis dze00540   Lipopolysaccharide biosynthesis dze00541   O-Antigen nucleotide sugar biosynthesis dze00542   O-Antigen repeat unit biosynthesis dze00543   Exopolysaccharide biosynthesis dze00550   Peptidoglycan biosynthesis dze00552   Teichoic acid biosynthesis dze00561   Glycerolipid metabolism dze00562   Inositol phosphate metabolism dze00564   Glycerophospholipid metabolism dze00565   Ether lipid metabolism dze00592   alpha-Linolenic acid metabolism dze00600   Sphingolipid metabolism dze00620   Pyruvate metabolism dze00623   Toluene degradation dze00625   Chloroalkane and chloroalkene degradation dze00626   Naphthalene degradation dze00627   Aminobenzoate degradation dze00630   Glyoxylate and dicarboxylate metabolism dze00633   Nitrotoluene degradation dze00640   Propanoate metabolism dze00650   Butanoate metabolism dze00660   C5-Branched dibasic acid metabolism dze00670   One carbon pool by folate dze00680   Methane metabolism dze00710   Carbon fixation by Calvin cycle dze00720   Other carbon fixation pathways dze00730   Thiamine metabolism dze00740   Riboflavin metabolism dze00750   Vitamin B6 metabolism dze00760   Nicotinate and nicotinamide metabolism dze00770   Pantothenate and CoA biosynthesis dze00780   Biotin metabolism dze00785   Lipoic acid metabolism dze00790   Folate biosynthesis dze00791   Atrazine degradation dze00860   Porphyrin metabolism dze00900   Terpenoid backbone biosynthesis dze00907   Pinene, camphor and geraniol degradation dze00910   Nitrogen metabolism dze00920   Sulfur metabolism dze00930   Caprolactam degradation dze00946   Degradation of flavonoids dze00997   Biosynthesis of various other secondary metabolites dze00999   Biosynthesis of various plant secondary metabolites dze01040   Biosynthesis of unsaturated fatty acids dze01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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