KEGG   PATHWAY: ecm01100
Entry
ecm01100                    Pathway                                
Name
Metabolic pathways - Escherichia coli SMS-3-5 (environmental)
Class
Pathway map
ecm01100  Metabolic pathways
ecm01100

Module
ecm_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ecm01100]
ecm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ecm01100]
ecm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ecm01100]
ecm_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ecm01100]
ecm_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ecm01100]
ecm_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ecm01100]
ecm_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ecm01100]
ecm_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ecm01100]
ecm_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ecm01100]
ecm_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ecm01100]
ecm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ecm01100]
ecm_M00012  Glyoxylate cycle [PATH:ecm01100]
ecm_M00015  Proline biosynthesis, glutamate => proline [PATH:ecm01100]
ecm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ecm01100]
ecm_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ecm01100]
ecm_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ecm01100]
ecm_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ecm01100]
ecm_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ecm01100]
ecm_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ecm01100]
ecm_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ecm01100]
ecm_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ecm01100]
ecm_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ecm01100]
ecm_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ecm01100]
ecm_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ecm01100]
ecm_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:ecm01100]
ecm_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ecm01100]
ecm_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ecm01100]
ecm_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ecm01100]
ecm_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ecm01100]
ecm_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ecm01100]
ecm_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ecm01100]
ecm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ecm01100]
ecm_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:ecm01100]
ecm_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ecm01100]
ecm_M00063  CMP-KDO biosynthesis [PATH:ecm01100]
ecm_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ecm01100]
ecm_M00082  Fatty acid biosynthesis, initiation [PATH:ecm01100]
ecm_M00083  Fatty acid biosynthesis, elongation [PATH:ecm01100]
ecm_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ecm01100]
ecm_M00087  beta-Oxidation [PATH:ecm01100]
ecm_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ecm01100]
ecm_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ecm01100]
ecm_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ecm01100]
ecm_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ecm01100]
ecm_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ecm01100]
ecm_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ecm01100]
ecm_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ecm01100]
ecm_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ecm01100]
ecm_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ecm01100]
ecm_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ecm01100]
ecm_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ecm01100]
ecm_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ecm01100]
ecm_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ecm01100]
ecm_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ecm01100]
ecm_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:ecm01100]
ecm_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:ecm01100]
ecm_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ecm01100]
ecm_M00149  Succinate dehydrogenase, prokaryotes [PATH:ecm01100]
ecm_M00150  Fumarate reductase, prokaryotes [PATH:ecm01100]
ecm_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ecm01100]
ecm_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ecm01100]
ecm_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ecm01100]
ecm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ecm01100]
ecm_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:ecm01100]
ecm_M00417  Cytochrome o ubiquinol oxidase [PATH:ecm01100]
ecm_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ecm01100]
ecm_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ecm01100]
ecm_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:ecm01100]
ecm_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ecm01100]
ecm_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:ecm01100]
ecm_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:ecm01100]
ecm_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ecm01100]
ecm_M00555  Betaine biosynthesis, choline => betaine [PATH:ecm01100]
ecm_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ecm01100]
ecm_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:ecm01100]
ecm_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ecm01100]
ecm_M00621  Glycine cleavage system [PATH:ecm01100]
ecm_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ecm01100]
ecm_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ecm01100]
ecm_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ecm01100]
ecm_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ecm01100]
ecm_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ecm01100]
ecm_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ecm01100]
ecm_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:ecm01100]
ecm_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:ecm01100]
ecm_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ecm01100]
ecm_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ecm01100]
ecm_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:ecm01100]
ecm_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ecm01100]
ecm_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:ecm01100]
ecm_M00922  CMP-Neu5Ac biosynthesis [PATH:ecm01100]
ecm_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ecm01100]
ecm_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:ecm01100]
ecm_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:ecm01100]
ecm_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:ecm01100]
ecm_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:ecm01100]
ecm_M00970  Proline degradation, proline => glutamate [PATH:ecm01100]
Organism
Escherichia coli SMS-3-5 (environmental) [GN:ecm]
Related
pathway
ecm00010  Glycolysis / Gluconeogenesis
ecm00020  Citrate cycle (TCA cycle)
ecm00030  Pentose phosphate pathway
ecm00040  Pentose and glucuronate interconversions
ecm00051  Fructose and mannose metabolism
ecm00052  Galactose metabolism
ecm00053  Ascorbate and aldarate metabolism
ecm00061  Fatty acid biosynthesis
ecm00071  Fatty acid degradation
ecm00121  Secondary bile acid biosynthesis
ecm00130  Ubiquinone and other terpenoid-quinone biosynthesis
ecm00190  Oxidative phosphorylation
ecm00220  Arginine biosynthesis
ecm00230  Purine metabolism
ecm00240  Pyrimidine metabolism
ecm00250  Alanine, aspartate and glutamate metabolism
ecm00260  Glycine, serine and threonine metabolism
ecm00261  Monobactam biosynthesis
ecm00270  Cysteine and methionine metabolism
ecm00280  Valine, leucine and isoleucine degradation
ecm00290  Valine, leucine and isoleucine biosynthesis
ecm00300  Lysine biosynthesis
ecm00310  Lysine degradation
ecm00330  Arginine and proline metabolism
ecm00332  Carbapenem biosynthesis
ecm00340  Histidine metabolism
ecm00350  Tyrosine metabolism
ecm00360  Phenylalanine metabolism
ecm00361  Chlorocyclohexane and chlorobenzene degradation
ecm00362  Benzoate degradation
ecm00364  Fluorobenzoate degradation
ecm00380  Tryptophan metabolism
ecm00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ecm00401  Novobiocin biosynthesis
ecm00410  beta-Alanine metabolism
ecm00430  Taurine and hypotaurine metabolism
ecm00440  Phosphonate and phosphinate metabolism
ecm00450  Selenocompound metabolism
ecm00460  Cyanoamino acid metabolism
ecm00470  D-Amino acid metabolism
ecm00480  Glutathione metabolism
ecm00500  Starch and sucrose metabolism
ecm00511  Other glycan degradation
ecm00520  Amino sugar and nucleotide sugar metabolism
ecm00521  Streptomycin biosynthesis
ecm00523  Polyketide sugar unit biosynthesis
ecm00525  Acarbose and validamycin biosynthesis
ecm00540  Lipopolysaccharide biosynthesis
ecm00541  O-Antigen nucleotide sugar biosynthesis
ecm00542  O-Antigen repeat unit biosynthesis
ecm00543  Exopolysaccharide biosynthesis
ecm00550  Peptidoglycan biosynthesis
ecm00552  Teichoic acid biosynthesis
ecm00561  Glycerolipid metabolism
ecm00562  Inositol phosphate metabolism
ecm00564  Glycerophospholipid metabolism
ecm00565  Ether lipid metabolism
ecm00592  alpha-Linolenic acid metabolism
ecm00600  Sphingolipid metabolism
ecm00620  Pyruvate metabolism
ecm00621  Dioxin degradation
ecm00622  Xylene degradation
ecm00623  Toluene degradation
ecm00625  Chloroalkane and chloroalkene degradation
ecm00626  Naphthalene degradation
ecm00627  Aminobenzoate degradation
ecm00630  Glyoxylate and dicarboxylate metabolism
ecm00633  Nitrotoluene degradation
ecm00640  Propanoate metabolism
ecm00650  Butanoate metabolism
ecm00660  C5-Branched dibasic acid metabolism
ecm00670  One carbon pool by folate
ecm00680  Methane metabolism
ecm00710  Carbon fixation by Calvin cycle
ecm00720  Other carbon fixation pathways
ecm00730  Thiamine metabolism
ecm00740  Riboflavin metabolism
ecm00750  Vitamin B6 metabolism
ecm00760  Nicotinate and nicotinamide metabolism
ecm00770  Pantothenate and CoA biosynthesis
ecm00780  Biotin metabolism
ecm00785  Lipoic acid metabolism
ecm00790  Folate biosynthesis
ecm00860  Porphyrin metabolism
ecm00900  Terpenoid backbone biosynthesis
ecm00907  Pinene, camphor and geraniol degradation
ecm00910  Nitrogen metabolism
ecm00920  Sulfur metabolism
ecm00930  Caprolactam degradation
ecm00946  Degradation of flavonoids
ecm00997  Biosynthesis of various other secondary metabolites
ecm00999  Biosynthesis of various plant secondary metabolites
ecm01040  Biosynthesis of unsaturated fatty acids
ecm01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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