PATHWAY: fra01100 Help Entry fra01100                    Pathway                                 Name Metabolic pathways - Frankia casuarinae Class BRITE hierarchy Pathway map fra01100   Metabolic pathways Module fra_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:fra01100] fra_M00002   Glycolysis, core module involving three-carbon compounds [PATH:fra01100] fra_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:fra01100] fra_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:fra01100] fra_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:fra01100] fra_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:fra01100] fra_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:fra01100] fra_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:fra01100] fra_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:fra01100] fra_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:fra01100] fra_M00015   Proline biosynthesis, glutamate => proline [PATH:fra01100] fra_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:fra01100] fra_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:fra01100] fra_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:fra01100] fra_M00021   Cysteine biosynthesis, serine => cysteine [PATH:fra01100] fra_M00026   Histidine biosynthesis, PRPP => histidine [PATH:fra01100] fra_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:fra01100] fra_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:fra01100] fra_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:fra01100] fra_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:fra01100] fra_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:fra01100] fra_M00082   Fatty acid biosynthesis, initiation [PATH:fra01100] fra_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:fra01100] fra_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:fra01100] fra_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:fra01100] fra_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:fra01100] fra_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:fra01100] fra_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:fra01100] fra_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:fra01100] fra_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:fra01100] fra_M00149   Succinate dehydrogenase, prokaryotes [PATH:fra01100] fra_M00151   Cytochrome bc1 complex respiratory unit [PATH:fra01100] fra_M00155   Cytochrome c oxidase, prokaryotes [PATH:fra01100] fra_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:fra01100] fra_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:fra01100] fra_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:fra01100] fra_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:fra01100] fra_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:fra01100] fra_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:fra01100] fra_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:fra01100] fra_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:fra01100] fra_M00621   Glycine cleavage system [PATH:fra01100] fra_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:fra01100] fra_M00778   Type II polyketide backbone biosynthesis, acyl-CoA + malonyl-CoA => polyketide [PATH:fra01100] fra_M00793   dTDP-L-rhamnose biosynthesis [PATH:fra01100] fra_M00844   Arginine biosynthesis, ornithine => arginine [PATH:fra01100] fra_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:fra01100] fra_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:fra01100] fra_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:fra01100] fra_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:fra01100] fra_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:fra01100] fra_M00930   Menaquinone biosynthesis, futalosine pathway [PATH:fra01100] fra_M00970   Proline degradation, proline => glutamate [PATH:fra01100] Organism Frankia casuarinae [GN:fra] Related pathway fra00010   Glycolysis / Gluconeogenesis fra00020   Citrate cycle (TCA cycle) fra00030   Pentose phosphate pathway fra00040   Pentose and glucuronate interconversions fra00051   Fructose and mannose metabolism fra00052   Galactose metabolism fra00061   Fatty acid biosynthesis fra00071   Fatty acid degradation fra00130   Ubiquinone and other terpenoid-quinone biosynthesis fra00190   Oxidative phosphorylation fra00220   Arginine biosynthesis fra00230   Purine metabolism fra00240   Pyrimidine metabolism fra00250   Alanine, aspartate and glutamate metabolism fra00253   Tetracycline biosynthesis fra00260   Glycine, serine and threonine metabolism fra00261   Monobactam biosynthesis fra00270   Cysteine and methionine metabolism fra00280   Valine, leucine and isoleucine degradation fra00290   Valine, leucine and isoleucine biosynthesis fra00300   Lysine biosynthesis fra00310   Lysine degradation fra00330   Arginine and proline metabolism fra00332   Carbapenem biosynthesis fra00340   Histidine metabolism fra00350   Tyrosine metabolism fra00360   Phenylalanine metabolism fra00361   Chlorocyclohexane and chlorobenzene degradation fra00362   Benzoate degradation fra00364   Fluorobenzoate degradation fra00380   Tryptophan metabolism fra00400   Phenylalanine, tyrosine and tryptophan biosynthesis fra00401   Novobiocin biosynthesis fra00404   Staurosporine biosynthesis fra00410   beta-Alanine metabolism fra00430   Taurine and hypotaurine metabolism fra00440   Phosphonate and phosphinate metabolism fra00450   Selenocompound metabolism fra00470   D-Amino acid metabolism fra00480   Glutathione metabolism fra00500   Starch and sucrose metabolism fra00514   Other types of O-glycan biosynthesis fra00515   Mannose type O-glycan biosynthesis fra00520   Amino sugar and nucleotide sugar metabolism fra00521   Streptomycin biosynthesis fra00523   Polyketide sugar unit biosynthesis fra00525   Acarbose and validamycin biosynthesis fra00541   O-Antigen nucleotide sugar biosynthesis fra00542   O-Antigen repeat unit biosynthesis fra00543   Exopolysaccharide biosynthesis fra00550   Peptidoglycan biosynthesis fra00552   Teichoic acid biosynthesis fra00561   Glycerolipid metabolism fra00562   Inositol phosphate metabolism fra00564   Glycerophospholipid metabolism fra00592   alpha-Linolenic acid metabolism fra00620   Pyruvate metabolism fra00622   Xylene degradation fra00623   Toluene degradation fra00625   Chloroalkane and chloroalkene degradation fra00626   Naphthalene degradation fra00627   Aminobenzoate degradation fra00630   Glyoxylate and dicarboxylate metabolism fra00633   Nitrotoluene degradation fra00640   Propanoate metabolism fra00643   Styrene degradation fra00650   Butanoate metabolism fra00660   C5-Branched dibasic acid metabolism fra00670   One carbon pool by folate fra00680   Methane metabolism fra00710   Carbon fixation by Calvin cycle fra00720   Other carbon fixation pathways fra00730   Thiamine metabolism fra00740   Riboflavin metabolism fra00750   Vitamin B6 metabolism fra00760   Nicotinate and nicotinamide metabolism fra00770   Pantothenate and CoA biosynthesis fra00780   Biotin metabolism fra00785   Lipoic acid metabolism fra00790   Folate biosynthesis fra00860   Porphyrin metabolism fra00900   Terpenoid backbone biosynthesis fra00903   Limonene degradation fra00906   Carotenoid biosynthesis fra00907   Pinene, camphor and geraniol degradation fra00909   Sesquiterpenoid and triterpenoid biosynthesis fra00910   Nitrogen metabolism fra00920   Sulfur metabolism fra00930   Caprolactam degradation fra00997   Biosynthesis of various other secondary metabolites fra00998   Biosynthesis of various antibiotics fra01040   Biosynthesis of unsaturated fatty acids fra01051   Biosynthesis of ansamycins fra01055   Biosynthesis of vancomycin group antibiotics fra01056   Biosynthesis of type II polyketide backbone fra01057   Biosynthesis of type II polyketide products fra01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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